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CAZyme Information: MGYG000001562_01392
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Alistipes timonensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis | |||||||||||
| CAZyme ID | MGYG000001562_01392 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 146904; End: 149621 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 27 | 550 | 2.8e-73 | 0.5518617021276596 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK10150 | PRK10150 | 2.51e-19 | 29 | 447 | 14 | 440 | beta-D-glucuronidase; Provisional |
| COG3250 | LacZ | 4.98e-18 | 29 | 466 | 14 | 446 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| pfam02837 | Glyco_hydro_2_N | 4.71e-09 | 30 | 162 | 4 | 135 | Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction. |
| pfam00703 | Glyco_hydro_2 | 4.70e-08 | 198 | 305 | 1 | 106 | Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| PRK10340 | ebgA | 6.82e-06 | 95 | 474 | 113 | 506 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBK63994.1 | 0.0 | 1 | 905 | 1 | 905 |
| QPH40113.1 | 0.0 | 6 | 904 | 7 | 906 |
| AZI26708.1 | 0.0 | 6 | 904 | 7 | 906 |
| QIH37197.1 | 0.0 | 28 | 904 | 20 | 896 |
| VTR43024.1 | 0.0 | 28 | 904 | 28 | 904 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3GM8_A | 2.09e-19 | 34 | 466 | 13 | 436 | ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482] |
| 7KGY_A | 5.77e-19 | 18 | 390 | 8 | 360 | ChainA, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_B Chain B, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_C Chain C, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_D Chain D, Beta-glucuronidase [Faecalibacterium prausnitzii] |
| 6LEM_B | 1.12e-16 | 30 | 447 | 13 | 434 | ChainB, Beta-D-glucuronidase [Escherichia coli] |
| 3K46_A | 1.13e-16 | 30 | 447 | 17 | 438 | Crystalstructure of full-length E. coli beta-glucuronidase [Escherichia coli K-12],3K46_B Crystal structure of full-length E. coli beta-glucuronidase [Escherichia coli K-12],3K4D_A Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound [Escherichia coli K-12],3K4D_B Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound [Escherichia coli K-12],6LEM_A Chain A, Beta-D-glucuronidase [Escherichia coli] |
| 6LEJ_B | 1.13e-16 | 30 | 447 | 15 | 436 | ChainB, Beta-D-glucuronidase [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P05804 | 6.17e-16 | 30 | 447 | 15 | 436 | Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2 |
| T2KN75 | 3.79e-15 | 22 | 504 | 23 | 500 | Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1 |
| Q8D4H3 | 2.00e-14 | 119 | 428 | 150 | 458 | Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2 |
| Q6LL68 | 2.63e-14 | 119 | 428 | 149 | 456 | Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1 |
| Q7MG04 | 1.35e-13 | 119 | 428 | 150 | 457 | Beta-galactosidase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=lacZ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000483 | 0.998333 | 0.000411 | 0.000248 | 0.000246 | 0.000249 |