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CAZyme Information: MGYG000001562_02178

You are here: Home > Sequence: MGYG000001562_02178

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
CAZyme ID MGYG000001562_02178
CAZy Family GH105
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
435 MGYG000001562_17|CGC2 49675.41 5.793
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001562 3488594 Isolate not provided not provided
Gene Location Start: 128008;  End: 129315  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001562_02178.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 84 425 3.1e-59 0.9668674698795181

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 6.17e-43 80 424 10 337
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 2.23e-36 91 430 36 357
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWO00682.1 1.06e-149 5 427 3 400
QEH42438.1 1.40e-147 12 427 10 400
BBE16470.1 1.02e-129 45 426 22 373
QNL48012.1 3.17e-126 46 428 23 375
SCD21779.1 9.05e-125 45 426 40 384

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3K11_A 2.38e-26 151 433 111 417
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
1NC5_A 1.65e-25 199 429 122 364
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 6.84e-25 199 429 112 354
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
5NOA_A 2.88e-20 220 383 158 326
PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron]
4Q88_A 1.86e-16 220 383 141 309
ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 9.04e-25 199 429 122 364
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
L7P9J4 4.22e-12 139 379 98 332
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1
T2KPL9 3.20e-11 272 379 227 331
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1
P0A3U6 6.31e-09 238 387 13 173
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 6.31e-09 238 387 13 173
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000062 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001562_02178.