CAZyme Information: MGYG000001562_02365

Basic Information

• Species: Alistipes timonensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
• CAZyme ID: MGYG000001562_02365
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
845		94869.01	8.8292

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001562	3488594	Isolate	not provided	not provided

• Gene Location: Start: 340245; End: 342782 Strand: -

Full Sequence      

MKRILLLAALFAALGAEAQLPAEIRLDKRSLRPRYREWARPTGGVTVTQNPPALLWPASG
DSKRALYRVRLSQDSTFAGAVVSEPFEWAAYACHEPLAEGRWYWQWSVSEPGCPERWSEV
NAFTVDASCRRFATPTGAELVRKVAAMPHHRLYVSRDGVDAFRTRTQRNPEARELLRKAR
RNLNMDLVPVAPTRPRDTTGMTPFQKKSLVNFMYHKFGEVVTQPVVDFSTAYLLTGEEPF
RDAAVRHALHAASLPVDSDATSEDFNRSAIMYGLAVGYDTACDRMTPEERAAVLEAIRVR
GEHFYRHYVKDFEVHSMDNHVWQHTFRNFFFSSIATLGDLPEAEKWFRYCYEVWCARFPI
LGGDDGGWHDGSSYMQANLVTFIYVPFVLTRLTGTDFFDLPWYRNLPSFLVYSFPKGSYA
TGFGDDYEKMTSPSQLYMGFADALARELPSPEARWYADRLIGDDPTNLYRSKGFALYRIL
TDKPADRVAPKAPARNTSRFYPDAGFSLMHTDPADASDDLMAAFFALPFGSTGHAHAAHN
GFTINYGGRQLFGGTGYYSNFNDKHTLMHYRSRGHNTILADGLAQVIGENGYGWLARFAD
NEALTYTLGDASHAYDSIRTPFWIDRMAKSEVAYTPENGLGDPGVTRFRRHFLFLKPDVI
VVYDELAAREPVAWTWLLHSHNRMASAGANAVAASNGPAEGRMDLFTSGELALNLTDRFF
SPAINWKKRTGPDGKVQEYVNQWHAEFTTAAKSRAQRFLAVFRITPEGRRPLALKRDSKG
RVTVGGWTVAAELDASKPASLSVTDRRGNAVLYNTPASKTGGSTVVRRRGEPVRELVDVV
PASVR

Enzyme Prediction     

No EC number prediction in MGYG000001562_02365.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	516	666	7.8e-42	0.9743589743589743

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	2.76e-154	30	483	2	476	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	2.55e-09	493	730	1	215	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QJB31323.1	6.01e-207	9	845	12	849
QJB37809.1	1.20e-206	9	845	12	849
ADY52365.1	5.92e-190	14	844	12	861
QLC64883.1	8.23e-178	4	811	9	840
QGK74206.1	2.40e-176	19	833	20	865

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	2.73e-134	1	841	1	864	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	1.68e-131	1	841	1	864	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	2.36e-35	41	680	28	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	4.00e-34	41	680	28	661	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000382	0.998838	0.000226	0.000198	0.000178	0.000166

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001562_02365.