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CAZyme Information: MGYG000001567_01535

You are here: Home > Sequence: MGYG000001567_01535

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000001567_01535
CAZy Family GT83
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
793 MGYG000001567_21|CGC1 79260.33 6.1591
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001567 2622247 MAG United States North America
Gene Location Start: 31855;  End: 34236  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001567_01535.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 58 534 3.6e-40 0.7851851851851852

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13231 PMT_2 4.47e-21 117 259 1 133
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
COG1807 ArnT 2.45e-16 112 432 58 321
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam02366 PMT 0.001 118 253 62 196
Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.
PRK07211 PRK07211 0.006 581 650 368 437
single-stranded DNA binding protein.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QWZ09319.1 2.00e-79 63 423 40 380
QUB37647.1 5.07e-59 60 793 203 794
QHU89858.1 5.33e-58 56 792 267 902
QHU90800.1 1.24e-55 56 792 267 899
QJU08762.1 1.48e-51 56 793 266 909

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37483 8.71e-35 56 325 2 263
Putative mannosyltransferase YycA OS=Bacillus subtilis (strain 168) OX=224308 GN=yycA PE=3 SV=2
O34575 1.39e-34 56 325 3 265
Putative mannosyltransferase YkcB OS=Bacillus subtilis (strain 168) OX=224308 GN=ykcB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.995208 0.003970 0.000577 0.000114 0.000049 0.000078

TMHMM  Annotations      download full data without filtering help

start end
61 80
133 155
162 184
194 211
224 238
243 262
269 291
355 377
406 428
433 452
459 481
486 508
520 542