dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001567_01707

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Species

Lineage

Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;

CAZyme ID

MGYG000001567_01707

CAZy Family

GH28

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
437	MGYG000001567_26\|CGC1	47510.47	4.8393

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001567	2622247	MAG	United States	North America

Gene Location

Start: 18476; End: 19789 Strand: -

No EC number prediction in MGYG000001567_01707.

Family	Start	End	Evalue	family coverage
GH28	33	403	2.8e-69	0.9076923076923077

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5434	Pgu1	4.97e-49	38	316	118	404	Polygalacturonase [Carbohydrate transport and metabolism].
PLN02188	PLN02188	2.89e-20	38	327	73	326	polygalacturonase/glycoside hydrolase family protein
pfam00295	Glyco_hydro_28	2.96e-20	39	322	11	255	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003	PLN03003	1.09e-18	97	323	111	304	Probable polygalacturonase At3g15720
PLN02793	PLN02793	2.06e-15	103	316	147	336	Probable polygalacturonase

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CCV64961.1	2.48e-158	11	437	9	435
AUX11674.1	9.47e-127	29	437	27	432
QXM18963.1	4.07e-125	34	435	33	429
QWC69112.1	1.15e-124	34	435	33	429
BBT90712.1	2.31e-124	34	435	33	429

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3JUR_A	8.82e-35	34	300	59	341	Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A	2.08e-32	15	305	56	355	Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1BHE_A	2.02e-17	34	316	39	310	ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
2UVE_A	1.35e-11	39	360	191	572	Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A7PZL3	5.99e-38	39	365	102	422	Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P18192	2.86e-18	34	316	65	336	Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
Q9LW07	3.00e-18	47	323	57	304	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P26509	1.35e-16	34	316	65	336	Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1
O22818	3.32e-16	52	319	42	320	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.999945	0.000094	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000001567_01707.