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CAZyme Information: MGYG000001571_00427

You are here: Home > Sequence: MGYG000001571_00427

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lacrimispora sp000526575
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora; Lacrimispora sp000526575
CAZyme ID MGYG000001571_00427
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
339 MGYG000001571_3|CGC2 35881.61 9.093
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001571 4730558 MAG United States North America
Gene Location Start: 49082;  End: 50101  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001571_00427.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 27 323 2.6e-97 0.8048128342245989

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 8.75e-08 119 291 2 157
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam07602 DUF1565 9.04e-06 38 185 1 174
Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ96087.1 2.43e-172 1 337 1 338
ABX43277.1 5.32e-138 8 336 9 336
QAA30980.1 7.80e-68 1 332 1 348
ADL51547.1 5.24e-64 32 323 49 371
BAV13166.1 5.24e-64 32 323 49 371

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.46e-52 34 317 17 315
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 4.99e-20 34 301 5 325
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A7 1.41e-51 34 317 42 340
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P0C1A6 1.07e-50 34 317 42 340
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P22751 3.36e-20 26 301 383 644
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P94576 8.96e-06 35 222 37 235
Uncharacterized protein YwoF OS=Bacillus subtilis (strain 168) OX=224308 GN=ywoF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000451 0.998744 0.000194 0.000221 0.000186 0.000167

TMHMM  Annotations      download full data without filtering help

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