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CAZyme Information: MGYG000001571_01880

You are here: Home > Sequence: MGYG000001571_01880

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lacrimispora sp000526575
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora; Lacrimispora sp000526575
CAZyme ID MGYG000001571_01880
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
580 MGYG000001571_13|CGC1 63055.9 6.8099
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001571 4730558 MAG United States North America
Gene Location Start: 21439;  End: 23181  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001571_01880.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 403 530 1.6e-24 0.601063829787234
CBM13 510 579 3.4e-19 0.35638297872340424

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 7.23e-32 478 565 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.89e-27 440 518 10 89
Ricin-type beta-trefoil lectin domain-like.
pfam00652 Ricin_B_lectin 1.65e-21 444 575 2 126
Ricin-type beta-trefoil lectin domain.
pfam14200 RicinB_lectin_2 1.08e-18 524 578 1 55
Ricin-type beta-trefoil lectin domain-like.
cd00161 RICIN 7.15e-17 443 577 1 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AQR94808.1 1.10e-243 5 429 2 427
AGF56074.1 2.21e-243 5 429 2 427
ASF57708.1 3.84e-208 28 486 25 492
ASF57707.1 4.70e-205 18 484 12 489
ASF57709.1 5.63e-203 28 484 25 490

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5U22_A 1.71e-193 30 428 23 421
Structureof N2152 from Neocallimastix frontalis [Neocallimastix frontalis]
3PG0_A 3.57e-13 431 486 15 70
Crystalstructure of designed 3-fold symmetric protein, ThreeFoil [synthetic construct]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000208 0.999113 0.000187 0.000160 0.000148 0.000143

TMHMM  Annotations      download full data without filtering help

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