dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001571_02931

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Species

Lacrimispora sp000526575

Lineage

Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora; Lacrimispora sp000526575

CAZyme ID

MGYG000001571_02931

CAZy Family

GH73

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
787	MGYG000001571_24\|CGC2	82215.66	8.6747

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001571	4730558	MAG	United States	North America

Gene Location

Start: 42018; End: 44381 Strand: +

No EC number prediction in MGYG000001571_02931.

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd14256	Dockerin_I	8.31e-21	730	785	2	57	Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam00404	Dockerin_1	3.97e-18	730	785	1	56	Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.
COG4193	LytD	1.29e-16	355	505	106	245	Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239	SH3_3	1.38e-10	46	107	1	54	Bacterial SH3 domain.
smart00287	SH3b	5.71e-10	38	103	1	62	Bacterial SH3 domain homologues.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRV21758.1	0.0	1	758	1	751
ADL03932.1	0.0	1	758	1	751
SET60659.1	0.0	1	764	1	748
QJU23484.1	2.08e-223	1	622	1	705
ASN95383.1	1.61e-222	1	622	1	705

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6FXO_A	1.21e-09	355	504	98	243	ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A	1.77e-09	376	488	108	212	ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A	2.39e-09	378	488	110	212	ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8CPQ1	6.46e-09	355	504	1189	1334	Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
O33635	1.46e-08	355	504	1189	1334	Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9	1.46e-08	355	504	1189	1334	Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q99V41	4.28e-08	355	504	1102	1247	Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q6GI31	4.28e-08	355	504	1111	1256	Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001557	0.996963	0.000577	0.000444	0.000221	0.000190

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