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CAZyme Information: MGYG000001588_00956

You are here: Home > Sequence: MGYG000001588_00956

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000001588_00956
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1678 182009.79 4.3979
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001588 2411406 MAG Canada North America
Gene Location Start: 2140;  End: 7176  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001588_00956.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 21 147 5.1e-17 0.8709677419354839

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 2.33e-12 17 147 5 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd14791 GH36 9.26e-10 542 731 4 182
glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
pfam00754 F5_F8_type_C 6.48e-08 171 319 3 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 1.01e-04 6 97 4 93
Substituted updates: Jan 31, 2002
pfam00754 F5_F8_type_C 4.70e-04 1358 1498 13 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCC62414.1 0.0 146 1595 9 1488
BAB80970.1 7.93e-176 185 1258 137 1205
SQG39183.1 7.93e-176 185 1258 137 1205
QQA11075.1 1.10e-175 185 1258 137 1205
ABG83191.1 1.52e-175 185 1258 137 1205

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000036 0.000015 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
1652 1674