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CAZyme Information: MGYG000001591_00351

You are here: Home > Sequence: MGYG000001591_00351

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides timonensis
CAZyme ID MGYG000001591_00351
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1080 MGYG000001591_3|CGC4 121815.84 5.8684
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001591 5999279 MAG China Asia
Gene Location Start: 111948;  End: 115190  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001591_00351.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 352 1074 5.3e-221 0.883495145631068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.0 33 876 2 870
alpha-L-rhamnosidase.
COG3250 LacZ 3.36e-04 927 1027 19 129
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 4.03e-04 938 1044 48 144
beta-D-glucuronidase; Provisional
pfam02837 Glyco_hydro_2_N 4.23e-04 957 1054 60 159
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
cd03143 A4_beta-galactosidase_middle_domain 7.06e-04 692 758 38 89
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA23785.1 0.0 5 1080 8 1084
SCD21026.1 0.0 4 1079 6 1081
BCG53972.1 0.0 1 1080 1 1080
QGY42775.1 0.0 2 1079 3 1078
SCM59077.1 0.0 24 1080 32 1083

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 4.61e-147 27 1074 42 1138
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 3.43e-111 1 1075 1 1099
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 9.04e-111 1 1075 1 1099
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 6.28e-103 1 1074 1 1155
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000295 0.287527 0.711818 0.000119 0.000125 0.000111

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001591_00351.