CAZyme Information: MGYG000001591_03054

Basic Information

• Species: Parabacteroides timonensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides timonensis
• CAZyme ID: MGYG000001591_03054
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1004	MGYG000001591_50|CGC1	113729.21	5.2889

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001591	5999279	MAG	China	Asia

• Gene Location: Start: 6588; End: 9602 Strand: -

Full Sequence      

MLVSSRERQGTTFGFTNTMIIMRKKITGLLFIVLTLCCSCQNTKQGEVQTGKDIDYNYLK
SHFQKPERIYGVNCWWWWLNGNVTKEAITKDLEAMKSKNFQGAMIFDAGGHNQRGNKDIP
EGPEFGSKEWNELFVYALDEAKRVGLEVGFNIQSGWNLGGPCVTPQYAAKQLTYTEFKVS
GGKVITQQMPDPLIRKGFYKDIVVLAFPIDETLQTDEGIESLDLKLGFHELGGSAPDCRF
LLTNTPYQTTQETGRKFYRIDRSNIIDLTAQMDKKGLLTCDIPPGEWCIMRIGYTCTNSE
VSTSSNSWQGNVLDYMSKEAFDFYWNNVVEPIFNAAGDHVGTTLKFMETDSWECGGMNWT
DNFVDEFRSYRGYDLLTYLPVIAGYVVDDIDTSNAFLADFRKTLGELVAHNHYAQFAEHA
HHYNMGIQPESAGPHAGPMDGIKNYGFSDIVMSEFWSPSPHRPRARDRFFLKQASSAAHI
YGKKIVGAESFTTIGPQWNDELWSEQKPSFDHEICSGLNRLYFHTFTCSPAEMGLPGQEY
FAGTHINPQVTWWEKSDALINYIQRIQMLVQNGRFVADVLYYYGDHVPNVFPFKDWDPAG
VMPGFDYDVTDETIFTQLKVVNGEIVVPGGISYRVLVLPNHRVLSLTVLEKVKDLLEQGA
HIIGYKPDKMISLTGGNSAQEHFKELSDDIWGTNEEGSGERKYGKGKIIWGVSAKNYLFS
LNIPADFSIWENKNETDYDYIHYTIGTTHIYFISNQTGECRNIMAQFRLSGFQPELWDAL
TGEIREAKAFNQKEGSTTVPLSLEPYGSIFVIFNREIDKSTQGKGISNYPKYETLQEISG
PWIVNFNSQRGAPASISFPELADWTTNTNENIKYYSGSAVYNKTFNVSFSKEKDISYFLQ
LENVKDVGIASVRLNGKDKGILWTKPFRVNITNELREGENSLEIEVINSWYNRVAGDEMG
QDRKKYTNTNIVLGHDFAGRTIQQIPLEPSGLLGPVTIRKGILE

Enzyme Prediction     

No EC number prediction in MGYG000001591_03054.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	261	999	1.2e-225	0.8847087378640777

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	3.09e-174	75	786	12	868	alpha-L-rhamnosidase.
cd03143	A4_beta-galactosidase_middle_domain	8.23e-05	632	714	53	134	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SCM58877.1	0.0	27	1000	10	976
AWW28678.1	0.0	19	1000	1	978
AQQ70075.1	0.0	59	998	32	957
ARK11122.1	0.0	63	998	34	953
ACU03164.1	0.0	29	998	10	954

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQM_A	2.67e-110	22	996	1	1096	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A	7.07e-110	22	996	1	1096	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6Q2F_A	1.15e-103	59	998	42	1138	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	8.84e-149	59	958	30	1099	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.023621	0.632757	0.340115	0.000653	0.002081	0.000770

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001591_03054.