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CAZyme Information: MGYG000001591_03707

You are here: Home > Sequence: MGYG000001591_03707

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides timonensis
CAZyme ID MGYG000001591_03707
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1036 MGYG000001591_72|CGC1 118144.77 6.5475
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001591 5999279 MAG China Asia
Gene Location Start: 6;  End: 3116  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001591_03707.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 58 920 2.8e-220 0.9720744680851063

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 31 1034 17 1026
beta-galactosidase.
PRK10340 ebgA 0.0 31 1034 4 999
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 9.77e-161 69 923 13 808
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 1.85e-104 358 642 2 301
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 1.03e-87 766 1032 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ59590.1 0.0 1 1036 6 1026
QUT89374.1 0.0 1 1036 6 1026
QDO67973.1 0.0 2 1036 3 1019
ALK86826.1 0.0 1 1036 1 1019
QEW35154.1 0.0 1 1036 1 1019

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 0.0 28 1036 4 998
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 0.0 29 1036 8 1002
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
6S6Z_A 5.15e-229 30 1007 3 953
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 5.31e-229 30 1007 4 954
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
6CVM_A 3.28e-173 30 1007 14 993
Atomicresolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_B Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_C Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_D Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6X1Q_A 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_B 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_C 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_D 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 2.91e-228 30 1007 4 954
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 7.54e-221 23 1007 12 1004
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q47077 2.80e-186 30 1030 17 1022
Beta-galactosidase OS=Enterobacter cloacae OX=550 GN=lacZ PE=3 SV=1
Q2XQU3 1.87e-183 30 1030 17 1023
Beta-galactosidase 2 OS=Enterobacter cloacae OX=550 GN=lacZ PE=3 SV=1
A3FEW8 1.52e-181 30 1033 17 1026
Beta-galactosidase OS=Enterobacter agglomerans OX=549 GN=lacZ PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000392 0.998754 0.000328 0.000183 0.000167 0.000150

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001591_03707.