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CAZyme Information: MGYG000001599_01574

You are here: Home > Sequence: MGYG000001599_01574

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900544075
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900544075
CAZyme ID MGYG000001599_01574
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
464 MGYG000001599_13|CGC1 53102.51 5.3686
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001599 4213385 MAG China Asia
Gene Location Start: 11276;  End: 12670  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001599_01574.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 187 445 3.4e-40 0.7538461538461538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.34e-08 204 321 229 344
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 6.84e-06 200 379 148 311
polygalacturonase
pfam00295 Glyco_hydro_28 1.30e-05 191 445 88 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
pfam13229 Beta_helix 1.62e-04 191 288 26 122
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048 NosD 4.55e-04 168 289 2 125
Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJR77942.1 3.70e-253 12 464 12 464
QJR73778.1 5.25e-253 12 464 12 464
QJR69445.1 5.25e-253 12 464 12 464
QJR65182.1 5.25e-253 12 464 12 464
QQY39815.1 6.68e-253 16 464 13 461

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000275 0.999108 0.000191 0.000139 0.000141 0.000143

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001599_01574.