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CAZyme Information: MGYG000001617_01652

You are here: Home > Sequence: MGYG000001617_01652

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_Q sp900547735
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_Q; Clostridium_Q sp900547735
CAZyme ID MGYG000001617_01652
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
554 MGYG000001617_17|CGC1 62718.4 5.0923
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001617 5446084 MAG China Asia
Gene Location Start: 60338;  End: 62002  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001617_01652.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 269 543 3.3e-37 0.7837837837837838

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 2.64e-70 262 551 17 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 7.67e-49 262 551 117 418
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
smart00636 Glyco_18 9.39e-25 286 542 52 333
Glyco_18 domain.
pfam00704 Glyco_hydro_18 1.82e-24 279 541 41 305
Glycosyl hydrolases family 18.
cd06549 GH18_trifunctional 1.87e-24 245 548 1 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK78586.1 8.27e-254 1 554 1 555
SEU04925.1 2.04e-231 1 552 1 549
ASN98192.1 9.97e-229 24 551 29 556
QRP36999.1 9.97e-229 24 551 29 556
QRV18839.1 1.10e-228 1 552 1 549

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 1.10e-20 314 542 81 310
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
5JH8_A 1.95e-20 331 548 86 307
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
4S3J_A 1.68e-19 313 551 180 421
Crystalstructure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_B Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_C Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876]
4S3K_A 3.07e-19 305 548 171 420
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
6LE8_A 2.62e-07 327 543 97 348
ChainA, Probable endochitinase [Caenorhabditis elegans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32258 1.20e-24 271 552 52 340
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
P37531 1.26e-23 310 548 169 416
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
O05495 2.48e-20 314 542 173 402
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
P0DPJ9 3.85e-18 313 551 179 420
Cortical fragment-lytic enzyme OS=Bacillus anthracis OX=1392 GN=sleL PE=2 SV=1
Q9K3E4 9.31e-17 313 551 179 420
Cortical fragment-lytic enzyme OS=Bacillus cereus OX=1396 GN=sleL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.816206 0.097237 0.069971 0.000841 0.000447 0.015313

TMHMM  Annotations      download full data without filtering help

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