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CAZyme Information: MGYG000001623_00822

You are here: Home > Sequence: MGYG000001623_00822

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Terrisporobacter othiniensis
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Terrisporobacter; Terrisporobacter othiniensis
CAZyme ID MGYG000001623_00822
CAZy Family GH39
CAZyme Description HTH-type transcriptional activator RhaS
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
752 MGYG000001623_28|CGC1 89006.36 8.2398
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001623 3867293 MAG China Asia
Gene Location Start: 15754;  End: 18012  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001623_00822.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 538 704 7e-18 0.37354988399071926

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG2207 AraC 2.35e-21 173 278 19 124
AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
smart00342 HTH_ARAC 1.56e-19 190 273 1 84
helix_turn_helix, arabinose operon control protein.
pfam12833 HTH_18 7.46e-15 196 275 1 81
Helix-turn-helix domain.
COG4977 GlxA 5.21e-13 169 278 215 324
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].
PRK10371 PRK10371 4.06e-12 169 274 185 291
transcriptional regulator MelR.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUH31795.1 9.48e-119 1 751 1 748
QUI23080.1 6.67e-101 1 749 1 742
QJA07548.1 9.49e-80 6 752 8 830
SHD75561.1 8.21e-75 3 723 9 830
AWC31744.1 5.64e-74 3 752 5 831

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5HJR8 1.16e-20 37 751 28 741
Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2
Q6GKK1 4.64e-20 37 751 28 741
Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q8NYT6 4.64e-20 37 751 28 741
Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q6GD21 4.64e-20 37 751 28 741
Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1
Q99XB1 3.24e-19 37 751 28 741
Uncharacterized HTH-type transcriptional regulator SAV0101 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0101 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001623_00822.