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CAZyme Information: MGYG000001623_01442

You are here: Home > Sequence: MGYG000001623_01442

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Terrisporobacter othiniensis
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Terrisporobacter; Terrisporobacter othiniensis
CAZyme ID MGYG000001623_01442
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2132 241434.68 4.7599
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001623 3867293 MAG China Asia
Gene Location Start: 3373;  End: 9771  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001623_01442.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 1746 1886 8.7e-41 0.9925373134328358
CBM51 1523 1657 1.8e-27 0.9925373134328358
CBM32 525 636 1e-15 0.8306451612903226

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 9.65e-47 1746 1887 3 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 5.62e-39 1746 1887 5 145
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam08305 NPCBM 2.92e-32 1523 1658 3 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 1.87e-25 1523 1657 5 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam16403 DUF5011 6.43e-14 1666 1739 3 71
Domain of unknown function (DUF5011). This small family of proteins is functionally uncharacterized. This family is found in Bacteroides, Prevotella, and Parabateroides. Proteins in this family are around 230 amino acids in length.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CEI71816.1 0.0 1 2128 1 2127
AIY84110.1 0.0 250 2120 28 1911
AQW26342.1 0.0 1 2118 1 2127
AOY53509.1 0.0 1 2118 1 2127
AMN32462.1 0.0 1 2118 1 2127

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JFS_A 3.37e-281 494 1443 27 980
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JS4_A 1.60e-239 939 1891 24 980
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
6XSX_A 4.03e-215 939 1444 24 529
ChainA, ZmpA Glycopeptidase [Clostridium perfringens ATCC 13124]
5KDJ_A 3.32e-177 871 1520 21 672
ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDJ_B ZmpB metallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124]
5KDN_A 9.50e-151 939 1443 24 529
ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDS_A ZmpB metallopeptidase in complex with an O-glycopeptide (a2,6-sialylated core-3 pentapeptide). [Clostridium perfringens ATCC 13124],5KDU_A ZmpB metallopeptidase in complex with a2,6-Sialyl T-antigen [Clostridium perfringens ATCC 13124]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000711 0.998343 0.000244 0.000259 0.000223 0.000194

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001623_01442.