logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001624_02838

You are here: Home > Sequence: MGYG000001624_02838

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Proteus cibarius
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Proteus; Proteus cibarius
CAZyme ID MGYG000001624_02838
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
388 43293.76 7.382
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001624 3841359 MAG China Asia
Gene Location Start: 16522;  End: 17688  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001624_02838.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 14 371 3.9e-143 0.9943502824858758

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR00215 lpxB 0.0 7 385 2 385
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
COG0763 LpxB 0.0 11 388 1 381
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
PRK00025 lpxB 0.0 11 388 1 377
lipid-A-disaccharide synthase; Reviewed
pfam02684 LpxB 9.76e-171 14 382 1 374
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
PRK01021 lpxB 1.21e-55 16 333 231 551
lipid-A-disaccharide synthase; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATM99607.1 1.14e-278 1 388 3 390
QQP26649.1 2.69e-277 1 388 3 390
QPB80642.1 2.69e-277 1 388 3 390
QIG05001.1 4.46e-276 1 388 3 390
QIF88732.1 1.81e-275 1 388 3 390

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8N_A 7.35e-210 7 387 2 382
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]
5W8S_A 6.01e-209 7 387 2 382
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q7N8N4 7.30e-223 10 388 11 389
Lipid-A-disaccharide synthase OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=lpxB PE=3 SV=1
Q8ZH55 8.83e-216 10 388 16 394
Lipid-A-disaccharide synthase OS=Yersinia pestis OX=632 GN=lpxB PE=3 SV=1
Q667K2 8.83e-216 10 388 16 394
Lipid-A-disaccharide synthase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) OX=273123 GN=lpxB PE=3 SV=1
A8GID3 3.28e-215 10 387 4 381
Lipid-A-disaccharide synthase OS=Serratia proteamaculans (strain 568) OX=399741 GN=lpxB PE=3 SV=1
B6HZF6 1.33e-214 7 387 2 382
Lipid-A-disaccharide synthase OS=Escherichia coli (strain SE11) OX=409438 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000030 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001624_02838.