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CAZyme Information: MGYG000001625_01227
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Eikenella corrodens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Neisseriaceae; Eikenella; Eikenella corrodens | |||||||||||
| CAZyme ID | MGYG000001625_01227 | |||||||||||
| CAZy Family | CE11 | |||||||||||
| CAZyme Description | UDP-3-O-acyl-N-acetylglucosamine deacetylase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3684; End: 4601 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE11 | 3 | 277 | 6.1e-111 | 0.992619926199262 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK13186 | lpxC | 6.52e-180 | 1 | 288 | 2 | 284 | UDP-3-O-acyl-N-acetylglucosamine deacetylase. |
| COG0774 | LpxC | 3.52e-174 | 1 | 289 | 2 | 288 | UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis]. |
| pfam03331 | LpxC | 3.98e-168 | 3 | 278 | 1 | 271 | UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. |
| TIGR00325 | lpxC | 5.01e-129 | 1 | 295 | 1 | 290 | UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK13188 | PRK13188 | 5.51e-92 | 1 | 276 | 3 | 298 | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QED92742.1 | 6.29e-220 | 1 | 305 | 1 | 305 |
| AZR58788.1 | 1.80e-219 | 1 | 305 | 1 | 305 |
| SNW08341.1 | 7.34e-219 | 1 | 305 | 1 | 305 |
| QMT40458.1 | 1.63e-190 | 1 | 305 | 1 | 305 |
| QEY25303.1 | 1.82e-187 | 1 | 305 | 1 | 305 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4MDT_A | 3.47e-111 | 1 | 300 | 2 | 299 | Structureof LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_B Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_C Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_D Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli] |
| 3P3G_A | 4.16e-111 | 1 | 300 | 2 | 299 | CrystalStructure of the Escherichia coli LpxC/LPC-009 complex [Escherichia coli IHE3034],3PS1_A Crystal structure of the Escherichia Coli LPXC/LPC-011 complex [Escherichia coli IHE3034],3PS2_A Crystal structure of the Escherichia Coli LPXC/LPC-012 complex [Escherichia coli IHE3034],3PS3_A Crystal structure of the Escherichia Coli LPXC/LPC-053 complex [Escherichia coli IHE3034],4IS9_A Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4IS9_B Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4ISA_A Crystal Structure of the Escherichia coli LpxC/BB-78485 complex [Escherichia coli IHE3034] |
| 4MQY_A | 4.92e-111 | 1 | 300 | 2 | 299 | CrystalStructure of the Escherichia coli LpxC/LPC-138 complex [Escherichia coli] |
| 5N8C_A | 9.56e-111 | 1 | 305 | 3 | 303 | Crystalstructure of Pseudomonas aeruginosa LpxC complexed with inhibitor [Pseudomonas aeruginosa],5N8C_B Crystal structure of Pseudomonas aeruginosa LpxC complexed with inhibitor [Pseudomonas aeruginosa] |
| 3NZK_A | 1.72e-110 | 1 | 300 | 7 | 304 | Structureof LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica],3NZK_B Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9JWS2 | 1.09e-178 | 1 | 301 | 1 | 301 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=lpxC PE=3 SV=1 |
| A9LZR8 | 1.55e-178 | 1 | 301 | 1 | 301 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=lpxC PE=3 SV=1 |
| Q9K1Q3 | 1.55e-178 | 1 | 301 | 1 | 301 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=lpxC PE=3 SV=1 |
| A1KR52 | 6.29e-178 | 1 | 301 | 1 | 301 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18) OX=272831 GN=lpxC PE=3 SV=1 |
| Q5F569 | 1.27e-177 | 1 | 301 | 1 | 301 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=lpxC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999747 | 0.000285 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |