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CAZyme Information: MGYG000001645_01666

You are here: Home > Sequence: MGYG000001645_01666

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_G sp900550135
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_G; Eubacterium_G sp900550135
CAZyme ID MGYG000001645_01666
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
429 48581.31 4.152
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001645 2556758 MAG United States North America
Gene Location Start: 3761;  End: 5050  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001645_01666.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 2.38e-12 352 413 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 9.24e-09 349 429 41 118
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 5.04e-08 343 415 117 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam13620 CarboxypepD_reg 2.24e-04 24 124 6 81
Carboxypeptidase regulatory-like domain.
pfam08486 SpoIID 0.002 195 255 15 73
Stage II sporulation protein. This domain is found in the stage II sporulation protein SpoIID. SpoIID is necessary for membrane migration as well as for some of the earlier steps in engulfment during bacterial endospore formation. The domain is also found in amidase enhancer proteins. Amidases, like SpoIID, are cell wall hydrolases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASN94441.1 9.71e-188 18 425 11 414
QRP40879.1 9.71e-188 18 425 11 414
QJU21247.1 2.77e-187 18 425 11 414
QIX92999.1 7.48e-185 18 425 11 414
ANU48790.1 1.06e-184 18 425 11 414

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001645_01666.