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CAZyme Information: MGYG000001652_00613
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | V9D3004 sp002349525 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; V9D3004; V9D3004 sp002349525 | |||||||||||
| CAZyme ID | MGYG000001652_00613 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 21858; End: 22823 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 4 | 320 | 9.1e-96 | 0.9900990099009901 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 1.44e-98 | 4 | 320 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 7.39e-93 | 43 | 318 | 1 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 4.41e-77 | 6 | 321 | 28 | 340 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZP05644.1 | 2.79e-111 | 2 | 321 | 1 | 326 |
| BCN30074.1 | 5.88e-111 | 2 | 321 | 1 | 319 |
| AZT91715.1 | 1.24e-110 | 2 | 321 | 4 | 331 |
| ADQ03732.1 | 6.13e-110 | 3 | 321 | 11 | 337 |
| ABX43367.1 | 2.06e-109 | 1 | 321 | 1 | 321 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5Y3X_A | 4.33e-111 | 3 | 321 | 31 | 357 | Crystalstructure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_B Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_C Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_D Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_E Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_F Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL] |
| 4L4O_A | 1.26e-107 | 2 | 321 | 11 | 337 | Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725] |
| 4PMD_A | 8.09e-107 | 2 | 321 | 11 | 337 | Crystalstructure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose [Caldicellulosiruptor bescii DSM 6725] |
| 4L4P_A | 1.02e-106 | 2 | 321 | 11 | 337 | themutant(E139A) structure in complex with xylotriose [Caldicellulosiruptor bescii DSM 6725] |
| 1N82_A | 8.14e-95 | 3 | 318 | 7 | 328 | Thehigh-resolution crystal structure of IXT6, a thermophilic, intracellular xylanase from G. stearothermophilus [Geobacillus stearothermophilus],1N82_B The high-resolution crystal structure of IXT6, a thermophilic, intracellular xylanase from G. stearothermophilus [Geobacillus stearothermophilus],3MUA_A Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus],3MUA_B Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P23556 | 2.19e-107 | 2 | 321 | 15 | 342 | Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=xynA PE=1 SV=1 |
| O69231 | 8.49e-92 | 3 | 318 | 7 | 328 | Endo-1,4-beta-xylanase B OS=Paenibacillus barcinonensis OX=198119 GN=xynB PE=1 SV=1 |
| P45703 | 4.16e-89 | 3 | 320 | 7 | 329 | Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=1 SV=1 |
| Q12603 | 4.52e-80 | 3 | 321 | 34 | 352 | Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1 |
| P10474 | 5.21e-67 | 3 | 320 | 44 | 371 | Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000065 | 0.000004 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |