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CAZyme Information: MGYG000001652_01131

You are here: Home > Sequence: MGYG000001652_01131

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species V9D3004 sp002349525
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; V9D3004; V9D3004 sp002349525
CAZyme ID MGYG000001652_01131
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
973 MGYG000001652_34|CGC1 106806.9 8.9701
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001652 2035634 MAG United States North America
Gene Location Start: 89;  End: 3010  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001652_01131.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 610 971 1.9e-76 0.9504950495049505

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 8.13e-70 681 969 14 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 7.76e-64 599 971 1 310
Glycosyl hydrolase family 10.
COG3693 XynA 2.93e-54 589 967 17 335
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
PRK00708 PRK00708 5.33e-10 148 245 104 202
twin-arginine translocase subunit TatB.
NF033913 fibronec_FbpA 6.23e-10 118 245 160 301
LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFU34339.1 5.11e-109 521 973 88 520
ABX41884.1 1.91e-103 562 973 134 515
BCJ93966.1 3.48e-95 573 973 141 513
CDM69886.1 2.99e-91 598 972 203 557
CBK75021.1 7.93e-91 579 973 12 382

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OFJ_A 1.75e-42 626 972 37 338
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
6D5C_A 5.70e-42 609 972 32 350
Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]
7NL2_A 8.11e-42 595 972 8 340
ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069]
5OFK_A 1.09e-41 626 972 37 338
Crystalstructure of CbXyn10C variant E140Q/E248Q complexed with xyloheptaose [Caldicellulosiruptor bescii DSM 6725],5OFL_A Crystal structure of CbXyn10C variant E140Q/E248Q complexed with cellohexaose [Caldicellulosiruptor bescii DSM 6725]
2W5F_A 4.53e-38 610 966 194 521
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P23551 1.10e-75 607 973 46 383
Endo-1,4-beta-xylanase A OS=Butyrivibrio fibrisolvens OX=831 GN=xynA PE=3 SV=1
P29126 3.80e-40 627 966 655 946
Bifunctional endo-1,4-beta-xylanase XylA OS=Ruminococcus flavefaciens OX=1265 GN=xynA PE=3 SV=1
Q60042 1.91e-39 595 970 362 686
Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1
Q60037 1.92e-39 588 970 359 690
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1
P10474 3.97e-38 626 972 71 372
Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000558 0.994635 0.004270 0.000203 0.000161 0.000143

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001652_01131.