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CAZyme Information: MGYG000001657_00300

You are here: Home > Sequence: MGYG000001657_00300

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900760425
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900760425
CAZyme ID MGYG000001657_00300
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1146 MGYG000001657_10|CGC1 126740.36 4.6915
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001657 2980281 MAG United States North America
Gene Location Start: 18609;  End: 22049  Strand: +

Full Sequence      Download help

MWSTITQPEN  MSVSSSMNCS  MRRAFFAVLL  TALLCSCTGR  RIVVGVLDCG  LDGQGTEYAA60
LKGLAGDAAS  IRYVSPEDAD  MLEGCDVLWY  HRLDTSAFMR  RESEAWERSI  RKYVEDGGKL120
ILSMEAVSLL  NEWGIEPAEI  EKWNYECIDE  GFGRKFGFHA  RFSHPLFDGL  HGGAYPWHGT180
EDNVCRVSGF  SGDRFPEAEG  AGVIACQWEY  VFMRPDRKVV  WETPVGKGSV  LAVGSCMYFS240
RDNHDSRIME  AFVRNCVEYM  AGKKEASCPV  NYWEPGCPDV  LPIHSCHDVK  CRICAAEYEA300
VRVPMPERMD  FPYTGDVLAR  TASREYTDVV  SPHCMAILPE  SGGIEEIWSH  PMMSLRDFRV360
WIETDSDGEP  VCLSSLVPMV  EVCPSAVIRN  YETGGLRIRE  IVTASPDDAL  VAVHYEWEGT420
GLRRIYTDFK  SNLRMMWPYD  ENVLGSLYYG  WSPELNAMVF  RDAGRRHVSI  VGGNVPGHPV480
MSGRYDGFTY  SGGRVRGIVT  DLVQAGAVVS  YDTEGLDALD  VVMAAGTEGD  EQAVEAYAEA540
LARPASVVEA  AERHYSSWLD  NVVAVNTPDR  RFNEAFRWAQ  ISCAQFIMET  PGLGTALAAG600
YASSRRGWGG  GHRVSGRPGY  AWYFGRDSEW  AAFAYADMGD  FETVRNCIDM  LICHQSPDGK660
IYHEMSTSGV  IHYDAADSTP  LFVSLIAHYL  RLSGDTGFVR  ERYDAVTKAM  DYCFSTDRDG720
DGLIENTCVG  HGWLEGGSLW  GFQTEFYLCG  LWKAALEDAS  YIADATGHRR  DSERYTDAAM780
NVSEPLEKFW  NEENGWYNWA  LNEDDTYKDD  FLVLTAVPVY  FGVLDSGRAH  TMAEKYTGPL840
MSVDWGARTV  YETSDAHGGG  AYHPRHVWPL  FTGWKSLAEY  KEGFYDSGFA  SLYGSLLTYR900
SFSLGHIAEV  INGDSYRNNG  ITQHQCWSET  MTVMPFVEGT  LGFSADALKG  RFSLSPRLPL960
DWERFSADGL  RVGDRRISMS  FEGTPGRAVY  TVTGGKGLDC  RFSPSFAPLS  EIRSVRVNGT1020
PVRPEVSDVN  SYVVPSMDIR  LDSKTVVEIL  YEPGMGVLPV  VMEGVPGEAS  SGFRAVSQES1080
TADGVDITVS  GRPGAEHILK  VWAPGGIASV  SGAEIAGREG  DVTALKVFFP  DDGEIPYSSR1140
TVSVKK1146

Enzyme Prediction      help

No EC number prediction in MGYG000001657_00300.

CAZyme Signature Domains help

Created with Snap5711417122928634340145851557363068774480285991697410311088633835GH78
Family Start End Evalue family coverage
GH78 633 835 6e-16 0.376984126984127

CDD Domains      download full data without filtering help

Created with Snap5711417122928634340145851557363068774480285991697410311088544980GDB1677775DUF608673928GDE_C620928SGA1677889COG4354
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3408 GDB1 1.32e-36 544 980 221 641
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
pfam04685 DUF608 7.50e-09 677 775 99 195
Glycosyl-hydrolase family 116, catalytic region. This represents a family of archaeal, bacterial and eukaryotic glycosyl hydrolases, that belong to superfamily GH116. The primary catabolic pathway for glucosylceramide is catalysis by the lysosomal enzyme glucocerebrosidase. In higher eukaryotes, glucosylceramide is the precursor of glycosphingolipids, a complex group of ubiquitous membrane lipids. Mutations in the human protein cause motor-neurone defects in hereditary spastic paraplegia. The catalytic nucleophile, identified in UniProtKB:Q97YG8_SULSO, is a glutamine-335, with the likely acid/base at Asp-442 and the aspartates at Asp-406 and Asp-458 residues also playing a role in the catalysis of glucosides and xylosides that are beta-bound to hydrophobic groups. The family is defined as GH116, which presently includes enzymes with beta-glucosidase, EC:3.2.1.21, beta-xylosidase, EC:3.2.1.37, and glucocerebrosidase EC:3.2.1.45 activity.
pfam06202 GDE_C 2.00e-08 673 928 80 368
Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme AGL. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homolog GDB1 that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33).
COG3387 SGA1 2.00e-07 620 928 284 593
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family [Carbohydrate transport and metabolism].
COG4354 COG4354 1.29e-05 677 889 442 668
Uncharacterized protein, contains GBA2_N and DUF608 domains [Function unknown].

CAZyme Hits      help

Created with Snap5711417122928634340145851557363068774480285991697410311088861129APF19554.1|GH03081133BBM70086.1|GH03081120ACY48648.1|GH03081133AEN73635.1|GH03261106AHG91625.1|GH0
Hit ID E-Value Query Start Query End Hit Start Hit End
APF19554.1 3.62e-184 86 1129 74 1107
BBM70086.1 2.94e-97 308 1133 14 836
ACY48648.1 6.05e-97 308 1120 33 843
AEN73635.1 1.15e-96 308 1133 33 855
AHG91625.1 8.22e-69 326 1106 58 838

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.015960 0.687389 0.294539 0.000590 0.000923 0.000584

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001657_00300.