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CAZyme Information: MGYG000001657_01235
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RC9 sp900760425 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900760425 | |||||||||||
| CAZyme ID | MGYG000001657_01235 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 8414; End: 10315 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 216 | 409 | 9e-81 | 0.994535519125683 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00656 | Amb_all | 2.91e-08 | 210 | 413 | 3 | 190 | Amb_all domain. |
| COG3866 | PelB | 5.65e-08 | 160 | 360 | 24 | 235 | Pectate lyase [Carbohydrate transport and metabolism]. |
| cd00063 | FN3 | 7.03e-05 | 34 | 114 | 2 | 88 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| smart00060 | FN3 | 2.62e-04 | 34 | 106 | 2 | 81 | Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| pfam00041 | fn3 | 5.56e-04 | 34 | 107 | 1 | 81 | Fibronectin type III domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBK63670.1 | 6.22e-207 | 155 | 633 | 124 | 606 |
| AFL85053.1 | 7.76e-154 | 159 | 625 | 42 | 488 |
| AXP81340.1 | 3.94e-148 | 166 | 627 | 43 | 517 |
| AXP82553.1 | 5.96e-146 | 164 | 627 | 121 | 563 |
| AHW58605.1 | 2.72e-145 | 166 | 632 | 38 | 489 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FI2_A | 1.97e-07 | 171 | 389 | 46 | 251 | VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q0CLG7 | 3.20e-46 | 165 | 616 | 21 | 414 | Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1 |
| Q4WL88 | 1.19e-45 | 153 | 616 | 9 | 415 | Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1 |
| B0XMA2 | 2.25e-45 | 153 | 616 | 9 | 415 | Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1 |
| Q5B297 | 1.15e-44 | 155 | 616 | 11 | 411 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
| B8NQQ7 | 1.51e-44 | 165 | 616 | 21 | 414 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000000 | 1.000028 | 0.000000 | 0.000000 | 0.000000 |