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CAZyme Information: MGYG000001659_00819

You are here: Home > Sequence: MGYG000001659_00819

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paraprevotella sp900760455
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella sp900760455
CAZyme ID MGYG000001659_00819
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
933 MGYG000001659_8|CGC1 103071.41 5.2949
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001659 3410285 MAG United States North America
Gene Location Start: 29327;  End: 32128  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001659_00819.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 399 532 1.3e-17 0.6914893617021277

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 2.07e-35 678 834 1 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam14200 RicinB_lectin_2 1.92e-14 434 521 4 85
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 2.31e-09 484 535 1 58
Ricin-type beta-trefoil lectin domain-like.
pfam00652 Ricin_B_lectin 4.72e-08 452 537 4 90
Ricin-type beta-trefoil lectin domain.
cd00161 RICIN 1.05e-07 402 531 1 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT88791.1 0.0 2 933 12 940
ALJ60208.1 0.0 2 933 12 940
ASB47762.1 2.11e-294 25 932 31 932
APZ45922.1 2.14e-238 7 933 12 930
AUC19784.1 2.14e-238 7 933 12 930

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5HON_A 1.14e-12 637 841 5 209
Structureof Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus],5HON_B Structure of Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus]
5HO0_A 2.17e-11 637 841 644 848
Crystalstructure of AbnA (closed conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HO2_A Crystal structure of AbnA (open conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HOF_A Crystal structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinopentaose [Geobacillus stearothermophilus],5HP6_A Structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus (a new conformational state) [Geobacillus stearothermophilus]
5G56_A 6.51e-11 366 620 434 695
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
3MPC_A 3.31e-08 540 620 2 83
ChainA, Fn3-like protein [Acetivibrio thermocellus ATCC 27405],3MPC_B Chain B, Fn3-like protein [Acetivibrio thermocellus ATCC 27405]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P16950 8.48e-07 536 629 922 1014
Amylopullulanase OS=Thermoanaerobacter thermohydrosulfuricus OX=1516 GN=apu PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000400 0.998684 0.000237 0.000265 0.000211 0.000177

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001659_00819.