CAZyme Information: MGYG000001661_00001

Basic Information

• Species: Bacteroides gallinarum
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides gallinarum
• CAZyme ID: MGYG000001661_00001
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
852	MGYG000001661_1|CGC1	97522.24	6.4649

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001661	3951783	MAG	United States	North America

• Gene Location: Start: 58; End: 2616 Strand: -

Full Sequence      

MKTRYMRVLLGILLSIVSFAPVKGNVTNVDFAPAHWIWYPSGRVLQNTFVLFRKEFNLER
QPKQAIGWILADSRYQLFVNGHRVQWGPAPHDPRWPEADPVDVTSLLKEGKNVIACQVLF
YGMGEGTWAMGKPGLIMNLDVDGEKIVTDNTWKSFLADSWKPGQYKRSFLRTLQECFDAN
KFPYGWDTADFQENADWIPASESQASAAKPSICAGFAEYQWEIYGNQSTTDIRQRSIPMM
KENNVSVDKLVETAWVTWKRPCEEYFDMLVPNAYEAEWADLAHKKSNDAWEVKDSLGKAA
ILTFDFKEQSVGWPYFTIDAPEGTIVELLVHEAHQPGGPVLLNSHFNAWSRFVCKEGINH
FETFDFESLRWLQLYIRNNSRSVTVSNVGMRRRQYNFPVVPQIHMKDGKLQRLMDAAVNT
LYNSAQETVVDGMARERQQYSGDGSHQLHVLYQAFGESRLPKRFIHTFSQGMTLDGYFLD
CWPAFDRLARIIERQMQLTDWGPILDHGVGFCFENYHYYQYTGDLDGLKGSYPRLLRFFD
YLKELRGNDKLLPVENIGIPSVWIDHQAFRQQKHKQCAFNLYVSAMCTRALLPLCNAFGD
VNKSREVKEFGDSLLKETVAAFWSSDQKAFVDNLPWVSEDQGQTYYSDRTLALAILFDMC
PNDDDTACVRLLADKNKIGVSYPCNAIWAMWALAKANRMDVILKDMRELWATMPSVTINN
TIQEFWQTEPDSWSQWSHCAVGPLIILYQGIAGIHPLKPGYEECMISPQLGDLTDVELEI
QTPAGGIHFKTEGKYGKRTLLLDIPAGIKAVLNLDSRENVKLKPLISNDSVKGKKQYELI
GGKTYKLNLKYM

Enzyme Prediction     

No EC number prediction in MGYG000001661_00001.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	302	813	3.1e-61	0.9801587301587301
CBM67	34	205	1.8e-36	0.9602272727272727

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam08531	Bac_rhamnosid_N	2.42e-13	75	211	16	161	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam17389	Bac_rhamnosid6H	1.62e-06	415	742	10	330	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ48891.1	0.0	1	852	1	852
QKH96609.1	0.0	9	851	9	849
BCG53425.1	0.0	1	852	1	876
AYQ31056.1	1.26e-307	29	850	53	878
AWI09471.1	5.44e-59	37	812	68	828

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2OKX_A	2.86e-19	34	814	8	941	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
3CIH_A	5.66e-17	407	821	308	701	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000524	0.998672	0.000211	0.000200	0.000187	0.000177

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001661_00001.