CAZyme Information: MGYG000001661_01897

Basic Information

• Species: Bacteroides gallinarum
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides gallinarum
• CAZyme ID: MGYG000001661_01897
• CAZy Family: PL29
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
724		79409.97	4.5494

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001661	3951783	MAG	United States	North America

• Gene Location: Start: 29980; End: 32154 Strand: -

Full Sequence      

MNIKQILLSAVCSLLLPLQSCDDDADKQAQAEYMKEQVAAFEGTVDRLNASILCYQSLLS
GEIPVGITPMETGYKVELSGGNAYNIGAGEAVDAFFPLITISEKGNWTYSFDGSNYLDFT
DPSGKTLNAYSLEDIEAAYRSPQLQIDSEGFWKMTCDGGTTYAYLSDASRSRIAAFGGKG
AGVSSLFSDIVYNETAGKLSLTLGVDKEVKDFPVISDFYLKVKGSEAEDGLTFFLNEERK
YEVETSDVVKTRIKAPDGWTVTLEDDELSIKAPATASAAKTHNINIIITSSKQYQRTVTL
EAKLLNTTFDADYCNVWKEFVSGSEDNVLLDFSYAGYMHGEVAPPEMEELIARGYKVFDV
TDYGAIPGDDKSDREAFLKALEAAGAKRSVSGNTTRMQVNGDAPLNAIIYFPKGEYILQT
EEEADKTISLTMGGFVIKGAGRNLTTLKMNARNTMATPGDMWTCPTMIEIKNYSGVNMKS
DITEVTADTPKGGFEITVSSTSKIKAGDWICLYVKNNDPEFVAKEIAPHPISDLDAATSI
VKNGAEIYDLHQVASVNGNKVTFKEPIMHEVEARYNWVIKEYKHYENVGVEDIAFEGKAE
ERFQHHESSSNGGSYDSEYKLIDLVRLTDSWMRRVNFVSVSEAASLVSCANVSAYDIEIS
GNRGHSAVRSNSSSRVFIGKVYDHSSGYRIPKAGQLAEWMENAGQYHGCGVSKPSMGAVI
WNVQ

Enzyme Prediction     

No EC number prediction in MGYG000001661_01897.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL29	357	683	6.9e-103	0.9966777408637874

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16378	DUF4988	5.08e-22	34	204	8	173	Domain of unknown function. This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Alistipes species. The function of this family remains unknown. The N-terminus of this model has been clipped by ~30 residues as it was capturing parts of collagen sequences, pfam01391.
pfam16315	DUF4955	5.10e-08	704	724	1	21	Domain of unknown function (DUF4955). This family consists of uncharacterized proteins around 850 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam12708	Pectate_lyase_3	7.47e-08	358	448	2	69	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QDM10828.1	5.27e-210	2	723	5	704
QUT78855.1	5.27e-210	2	723	5	704
QNL40303.1	1.49e-209	2	723	5	704
QIU93728.1	6.48e-187	4	724	2	718
QRQ54963.1	3.08e-184	2	724	5	728

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000054	0.033792	0.966136	0.000016	0.000025	0.000018

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001661_01897.