CAZyme Information: MGYG000001661_02360

Basic Information

• Species: Bacteroides gallinarum
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides gallinarum
• CAZyme ID: MGYG000001661_02360
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
815	MGYG000001661_23|CGC2	89536.12	4.3365

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001661	3951783	MAG	United States	North America

• Gene Location: Start: 47853; End: 50300 Strand: -

Full Sequence      

MRYFLFILLAGLLGACSDEGELNGAVGADNLELSKNELKLSNVAGSSTVDITATGDWVAA
VVEPAAGTEQAWLTLSKDSGTGSDELRLFVTENTDGAKRTGKVKITMAGAGSTLEQEVTV
EQLGADPDILFEFTSEPVSFRGAEVELKVVANIEWEMTIDEQCDWIEVVEEVPATRSFTT
DNLKLKIALNTGNARTADLVFNTVGEYKLQRVLTVTQEAVNGTATVKWDKYVIPYKCRTL
VIPFVQEGEEQVEDFDAIPSDSWITHNKRESTSREIVLTIADNEDFLPRTSTVRILDKTI
TIFQYGKPDTSIGDDKSVSALAFPGAEGGGRFTTGGRGGVLYKVTNLEDYGENEAPIEGS
LRYGIEQIQGPRTIVFDVDGTIELKQGIYLINYPDLSIIGQTAPGEGITLKNYNFSFNLS
KKPEEGAGGSINAIVRFLRIRPGDASSDYAEDAVGGRYFKDGIIDHVTASWSVDETLTFY
GVQNFTAQWCIASESLNLSNHAKGAHGYGAMFSGDNTTFHHILLAHHGSRCPRISDLSEP
GTEGEYDYCGYFDVRNNVYYNWSESGFGSYGGKYAEFNLTNCYYKPGPATGTGYKSYRIL
STDPTARAYIEGNYVEGNSKVSSDNWTDGVWAQFDKSLVEVGVSDEEKQAMKMADYHPFS
KVTNHTAQVAYERVLDYAGASLHRDEIDQRIVSEVRAGSAPYKGSKMSYWDEEGNLVTLK
DSDKKPGIIDTPSDAAGGYVEMKKGYLWPDSDNDGIPDIWELAYGMNPDDPGDAGEISTS
VDPNGRYSNLEVYFHNLVQHIVYYQNQGGQSMERN

Enzyme Prediction     

No EC number prediction in MGYG000001661_02360.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	380	584	4.8e-63	0.9890710382513661

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd14948	BACON	7.50e-17	31	122	2	82	Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.
pfam13004	BACON	1.19e-06	65	122	4	60	Putative binding domain, N-terminal. The BACON (Bacteroidetes-Associated Carbohydrate-binding Often N-terminal) domain is an all-beta domain found in diverse architectures, principally in combination with carbohydrate-active enzymes and proteases. These architectures suggest a carbohydrate-binding function which is also supported by the nature of BACON's few conserved amino-acids. The phyletic distribution of BACON and other data tentatively suggest that it may frequently function to bind mucin. Further work with the characterized structure of a member of glycoside hydrolase family 5 enzyme, Structure 3ZMR, has found no evidence for carbohydrate-binding for this domain.
cd14948	BACON	3.16e-06	131	218	2	83	Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.
pfam19190	BACON_2	3.34e-06	31	125	2	91	Viral BACON domain. This family represents a distinct class of BACON domains found in crAss-like phages, the most common viral family in the human gut, in which they are found in tail fiber genes. This suggests they may play a role in phage-host interactions.
cd14948	BACON	3.90e-04	242	304	9	82	Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain. The BACON domain is found in diverse domain architectures and accociated with a wide variety of domains, including carbohydrate-active enzymes and proteases. It was named for its suggested function of carbohydrate binding; the latter was inferred from domain architectures, sequence conservation, and phyletic distribution. However, recent experimental data suggest that its primary function in Bacteroides ovatus endo-xyloglucanase BoGH5A is to distance the catalytic module from the cell surface and confer additional mobility to the catalytic domain for attack of the polysaccharide. No evidence for a direct role in carbohydrate binding could be found in that case. The large majority of BACON domains are found in Bacteroidetes.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT78065.1	0.0	1	814	1	794
ALJ48967.1	0.0	1	814	1	794
SCV08385.1	0.0	1	814	1	794
QRQ55777.1	0.0	1	814	1	794
QGT73513.1	0.0	1	814	1	794

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B8NQQ7	5.56e-38	318	798	17	414	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83	5.56e-38	318	798	17	414	Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297	1.95e-37	317	798	17	411	Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7	1.57e-36	312	798	11	414	Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q4WL88	6.02e-35	316	798	16	415	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	1.000044	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001661_02360.