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CAZyme Information: MGYG000001663_00682

You are here: Home > Sequence: MGYG000001663_00682

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900760675
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900760675
CAZyme ID MGYG000001663_00682
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
713 MGYG000001663_6|CGC2 76646.74 4.9579
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001663 3090424 MAG United States North America
Gene Location Start: 73924;  End: 76065  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001663_00682.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 288 481 1.1e-77 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 8.31e-07 221 434 23 236
Pectate lyase [Carbohydrate transport and metabolism].
cd00063 FN3 3.98e-06 132 209 8 91
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
smart00060 FN3 2.59e-05 132 201 8 83
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
smart00656 Amb_all 3.72e-05 282 518 3 185
Amb_all domain.
pfam00041 fn3 0.005 132 204 7 85
Fibronectin type III domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63670.1 1.30e-259 13 709 2 602
AFL85053.1 8.96e-139 238 703 47 486
AXP81340.1 4.02e-136 236 713 41 523
AXP82553.1 5.72e-134 238 703 123 559
AXP81339.1 1.22e-132 193 707 534 1018

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 4.65e-47 236 696 20 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 8.12e-46 236 696 20 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B0XMA2 8.29e-46 236 696 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 2.15e-45 236 696 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 1.43e-44 236 696 21 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000059 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001663_00682.