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CAZyme Information: MGYG000001668_01443

You are here: Home > Sequence: MGYG000001668_01443

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1259 sp900760875
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UBA1259; UBA1259 sp900760875
CAZyme ID MGYG000001668_01443
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
544 60738.98 5.3893
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001668 1885348 MAG United States North America
Gene Location Start: 60;  End: 1694  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001668_01443.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 50 543 1.7e-74 0.9801587301587301

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17390 Bac_rhamnosid_C 1.12e-05 486 542 1 58
Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL50446.1 2.77e-125 11 543 42 578
QGQ98689.1 5.87e-125 7 543 12 556
BCA48698.1 7.44e-125 11 543 45 588
QUT42018.1 7.44e-125 11 543 45 588
ACU04507.1 2.44e-124 53 543 80 570

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CIH_A 1.98e-30 41 531 182 683
Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
4XHC_A 1.86e-15 47 480 89 538
ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000037 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001668_01443.