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CAZyme Information: MGYG000001671_01622
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | HGM11507 sp900761005 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; UMGS1840; UMGS1840; HGM11507; HGM11507 sp900761005 | |||||||||||
| CAZyme ID | MGYG000001671_01622 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2555; End: 5779 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 494 | 811 | 2.4e-36 | 0.916923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.37e-17 | 487 | 793 | 117 | 451 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00395 | SLH | 3.98e-08 | 951 | 992 | 1 | 42 | S-layer homology domain. |
| pfam00295 | Glyco_hydro_28 | 4.21e-08 | 578 | 764 | 86 | 273 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 8.91e-08 | 554 | 791 | 138 | 378 | polygalacturonase |
| pfam00395 | SLH | 9.11e-06 | 890 | 932 | 1 | 42 | S-layer homology domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QTH43708.1 | 1.14e-122 | 345 | 816 | 2 | 466 |
| QIU92674.1 | 8.07e-56 | 347 | 799 | 26 | 466 |
| ALJ04708.1 | 3.85e-55 | 345 | 810 | 40 | 483 |
| AWW32777.1 | 9.88e-55 | 345 | 814 | 25 | 497 |
| APA66227.1 | 1.48e-53 | 337 | 816 | 17 | 496 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 1.56e-12 | 492 | 797 | 84 | 451 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 6BT4_A | 1.04e-08 | 907 | 1062 | 42 | 194 | Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis] |
| 3PYW_A | 1.06e-08 | 907 | 1062 | 21 | 173 | Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| C6CRV0 | 7.69e-15 | 890 | 1063 | 1283 | 1458 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| P38537 | 2.10e-14 | 892 | 1064 | 35 | 206 | Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1 |
| P38535 | 1.37e-13 | 898 | 1064 | 914 | 1081 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| P38536 | 2.78e-13 | 898 | 1064 | 1688 | 1855 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
| P19424 | 4.39e-12 | 903 | 1067 | 53 | 217 | Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000203 | 0.999196 | 0.000152 | 0.000154 | 0.000143 | 0.000133 |