CAZyme Information: MGYG000001672_00494

Basic Information

• Species: UMGS995 sp900547465
• Lineage: Bacteria; Firmicutes; Bacilli; RF39; UBA660; UMGS995; UMGS995 sp900547465
• CAZyme ID: MGYG000001672_00494
• CAZy Family: GH0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
406	MGYG000001672_6|CGC2	46229.62	4.4284

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001672	1285890	MAG	United States	North America

• Gene Location: Start: 24940; End: 26160 Strand: -

Full Sequence      

MAKGYLKVNVYSDTIANPIANATIDIIKNGEVIDSVKTNENGETEKITLNTVDKSYSEEE
QYEVKPYETYDLLVKALGLRDKKIEGVQILADTTSLQEVYLESIDEGKGEQTDVITPNTL
WGNYPEKISEDQEETETGITTYVLQRVEVPQNIIVHDGTPSNTSAKNYTVPFIDYIKNVA
SSEIYSTWPEETIKANVLAIISFTLNRVYTEWYRNKGYDFTITSTTTYDQKYTRGGTIFE
PISNIVDDIFNNYLKSGIMPNPLLAHYKNKTSEKGYLSQWGSKNLGDKGYNALRILQYYY
GNNINIYEAEVIEDYPYSFTTNLKEGDCSNDVYILQNALNYIRGSYPGIPAIENPSGKFD
KQTKEAVEVFQKVFNLSRTGIVNYQTWYKISYILTAVTDMTESIYK

Enzyme Prediction     

No EC number prediction in MGYG000001672_00494.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01471	PG_binding_1	2.88e-11	329	390	2	57	Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409	PGRP	1.84e-05	322	399	38	111	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam08486	SpoIID	2.41e-05	169	232	10	71	Stage II sporulation protein. This domain is found in the stage II sporulation protein SpoIID. SpoIID is necessary for membrane migration as well as for some of the earlier steps in engulfment during bacterial endospore formation. The domain is also found in amidase enhancer proteins. Amidases, like SpoIID, are cell wall hydrolases.
COG3409	PGRP	2.83e-04	326	390	124	183	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
TIGR02669	SpoIID_LytB	0.001	274	300	229	260	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
VCV21206.1	3.72e-112	3	404	13	419
QJU14725.1	6.59e-108	3	404	16	421
QQQ92685.1	6.59e-108	3	404	16	421
ASU27931.1	6.59e-108	3	404	16	421
QEI32542.1	1.24e-107	3	402	23	428

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000034	0.000003	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001672_00494.