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CAZyme Information: MGYG000001673_00816

You are here: Home > Sequence: MGYG000001673_00816

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1537 sp900552695
Lineage Bacteria; Firmicutes_A; Clostridia; UBA1212; UBA1255; UMGS1537; UMGS1537 sp900552695
CAZyme ID MGYG000001673_00816
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
748 84685.41 4.884
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001673 2567696 MAG United States North America
Gene Location Start: 10563;  End: 12809  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001673_00816.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 240 704 4.8e-65 0.9107142857142857

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 7.27e-19 328 652 3 330
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA24423.1 8.44e-195 4 699 95 790
QYM79910.1 8.49e-193 9 698 15 706
AIE86269.1 1.49e-162 4 688 11 678
QHI68754.1 1.74e-156 14 693 19 712
QTH42093.1 3.73e-149 4 707 7 732

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001673_00816.