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CAZyme Information: MGYG000001681_00701
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus sp900761275 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; Ruminococcus sp900761275 | |||||||||||
| CAZyme ID | MGYG000001681_00701 | |||||||||||
| CAZy Family | cohesin | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 251; End: 2884 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| cohesin | 263 | 386 | 2e-18 | 0.9701492537313433 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd14257 | CttA_X | 3.00e-25 | 633 | 751 | 1 | 116 | X module of the carbohydrate-binding protein CttA and similar proteins. This model represents a putative carbohydrate-binding domain conserved in Ruminococcus, which sits N-terminal to a dockerin repeat; the protein may be a component of the Ruminococcus cellulosome system. This X module does not share similarities with other known X modules from cellulolytic bacteria and may have a structural role. |
| pfam00963 | Cohesin | 2.72e-14 | 263 | 395 | 1 | 139 | Cohesin domain. Cohesin domains interact with a complementary domain, termed the dockerin domain. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. |
| pfam00963 | Cohesin | 1.10e-11 | 122 | 254 | 1 | 139 | Cohesin domain. Cohesin domains interact with a complementary domain, termed the dockerin domain. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. |
| cd08548 | Type_I_cohesin_like | 8.27e-09 | 263 | 393 | 1 | 135 | Type I cohesin domain, interaction partner of dockerin. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I cohesins; their interactions with dockerin mediate assembly of a range of dockerin-borne enzymes to the complex. |
| cd08548 | Type_I_cohesin_like | 2.94e-07 | 454 | 584 | 1 | 135 | Type I cohesin domain, interaction partner of dockerin. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I cohesins; their interactions with dockerin mediate assembly of a range of dockerin-borne enzymes to the complex. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CDE12955.1 | 6.57e-06 | 748 | 868 | 1208 | 1304 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5N5P_A | 5.35e-41 | 261 | 395 | 5 | 135 | Crystalstructure of Ruminococcus flavefaciens' type III complex containing the fifth cohesin from scaffoldin B and the dockerin from scaffoldin A [Ruminococcus flavefaciens FD-1],5N5P_C Crystal structure of Ruminococcus flavefaciens' type III complex containing the fifth cohesin from scaffoldin B and the dockerin from scaffoldin A [Ruminococcus flavefaciens FD-1] |
| 4WKZ_A | 1.42e-22 | 642 | 862 | 15 | 222 | Complexof autonomous ScaG cohesin CohG and X-doc domains [Ruminococcus flavefaciens FD-1] |
| 4IU2_B | 1.92e-22 | 642 | 862 | 15 | 222 | Cohesin-dockerin-X domain complex from Ruminococcus flavefacience [Ruminococcus flavefaciens] |
| 4IU3_B | 1.92e-22 | 642 | 862 | 15 | 222 | Cohesin-dockerin-X domain complex from Ruminococcus flavefacience [Ruminococcus flavefaciens] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999795 | 0.000252 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |