logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001693_02469

You are here: Home > Sequence: MGYG000001693_02469

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Halorubrum lipolyticum
Lineage Archaea; Halobacteriota; Halobacteria; Halobacteriales; Haloferacaceae; Halorubrum; Halorubrum lipolyticum
CAZyme ID MGYG000001693_02469
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
676 73217.08 5.4182
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001693 3425042 Isolate Canada North America
Gene Location Start: 7065;  End: 9095  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001693_02469.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 403 528 1.1e-22 0.9130434782608695

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 1.06e-35 391 649 1 212
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16889 Hepar_II_III_N 6.64e-15 192 370 128 317
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.
COG5360 COG5360 4.02e-04 304 474 227 393
Uncharacterized conserved protein, heparinase superfamily [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCC49294.1 6.83e-276 45 676 30 614
ARS89978.1 6.25e-142 50 587 38 571
AJF27519.1 3.71e-136 53 672 32 621
AHB68355.1 5.17e-136 53 672 20 609
AEM59303.1 7.37e-136 53 672 32 621

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MMH_A 1.34e-10 140 477 92 451
Crystalstructure of heparan sulfate lyase HepC from Pedobacter heparinus [Pedobacter heparinus]
4MMI_A 1.34e-10 140 477 92 451
Crystalstructure of heparan sulfate lyase HepC mutant from Pedobacter heparinus [Pedobacter heparinus]
4FNV_A 3.72e-06 105 335 93 331
CrystalStructure of Heparinase III [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59289 7.44e-10 140 477 116 475
Heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepC PE=1 SV=1
C7EXL6 9.87e-10 132 473 94 478
Heparin-sulfate lyase OS=Bacteroides stercoris OX=46506 GN=hepC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000033 0.000014 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001693_02469.