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CAZyme Information: MGYG000001699_00659

You are here: Home > Sequence: MGYG000001699_00659

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_J ihumii
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_J; Clostridium_J ihumii
CAZyme ID MGYG000001699_00659
CAZy Family GH113
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
356 41845.65 4.9372
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001699 4433668 Isolate France Europe
Gene Location Start: 75618;  End: 76688  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001699_00659.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH113 52 333 2.5e-42 0.8594771241830066

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd19608 GH113_mannanase-like 1.20e-43 45 354 12 310
Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.
cd19606 GH113-like 1.21e-10 161 330 137 271
Glycoside hydrolase family 113 beta-mannosidase and similar proteins. Family 113 glycoside hydrolases cleave (1->4)-beta-glycosidic linkages, such as endo-1,4-beta-mannanase. This family also includes TIM-barrel domains found in gene transfer agent proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUN17378.1 1.16e-130 26 356 36 364
AUM98762.1 1.16e-130 26 356 36 364
APQ77895.1 1.16e-130 26 356 36 364
CBZ03185.1 1.16e-130 26 356 36 364
AXG95299.1 3.32e-130 26 356 36 364

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5YLH_A 9.52e-06 161 329 140 273
Structureof GH113 beta-1,4-mannanase [Amphibacillus xylanus NBRC 15112],5YLH_B Structure of GH113 beta-1,4-mannanase [Amphibacillus xylanus NBRC 15112]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.245456 0.064805 0.688442 0.000187 0.000173 0.000935

TMHMM  Annotations      download full data without filtering help

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