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CAZyme Information: MGYG000001701_00198

You are here: Home > Sequence: MGYG000001701_00198

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium afermentans
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium afermentans
CAZyme ID MGYG000001701_00198
CAZy Family GT85
CAZyme Description Galactan 5-O-arabinofuranosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
609 MGYG000001701_6|CGC1 66314.46 4.9769
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001701 2240769 Isolate France Europe
Gene Location Start: 40234;  End: 42063  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001701_00198.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT85 20 419 9e-142 0.9391100702576113

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12250 AftA_N 1.06e-169 20 412 3 399
Arabinofuranosyltransferase N terminal. This domain family is found in bacteria, and is typically between 430 and 441 amino acids in length. This family is the N terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The N terminal region has been predicted to span 11 transmembrane regions.
pfam12249 AftA_C 1.05e-80 436 608 1 177
Arabinofuranosyltransferase A C terminal. This domain family is found in bacteria, and is typically between 179 and 190 amino acids in length. This family is the C terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The C terminal region is predicted to be directed towards the periplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNP94223.1 0.0 1 609 1 609
AIL95983.1 0.0 10 609 1 600
QNP90306.1 0.0 1 609 1 614
AQQ14090.1 1.93e-257 3 608 12 637
QQU84617.1 4.51e-254 3 609 12 638

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NTW4 7.95e-171 5 608 15 659
Galactan 5-O-arabinofuranosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=aftA PE=1 SV=1
A0R611 4.91e-116 12 609 6 614
Galactan 5-O-arabinofuranosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=aftA PE=3 SV=1
P9WN02 2.94e-100 10 609 27 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=aftA PE=3 SV=1
P9WN03 2.94e-100 10 609 27 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=aftA PE=1 SV=1
Q7TVN5 2.94e-100 10 609 27 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=aftA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000026 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
15 37
50 72
87 109
164 186
190 209
216 235
250 272
284 306
332 354
361 383
393 415