Species | Corynebacterium afermentans | |||||||||||
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Lineage | Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium afermentans | |||||||||||
CAZyme ID | MGYG000001701_00266 | |||||||||||
CAZy Family | GT51 | |||||||||||
CAZyme Description | Monofunctional biosynthetic peptidoglycan transglycosylase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 25845; End: 28289 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT51 | 66 | 252 | 1.2e-62 | 0.9830508474576272 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG0744 | MrcB | 1.94e-120 | 29 | 728 | 26 | 656 | Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis]. |
COG5009 | MrcA | 6.61e-78 | 28 | 628 | 20 | 689 | Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]. |
pfam00912 | Transgly | 3.79e-72 | 66 | 253 | 2 | 177 | Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains. |
PRK09506 | mrcB | 3.31e-47 | 74 | 617 | 208 | 708 | bifunctional glycosyl transferase/transpeptidase; Reviewed |
COG4953 | PbpC | 4.91e-45 | 63 | 718 | 41 | 618 | Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QNP94276.1 | 0.0 | 1 | 801 | 1 | 802 |
AIL96031.1 | 0.0 | 1 | 802 | 1 | 788 |
QNP90366.1 | 0.0 | 1 | 801 | 1 | 798 |
AOX06417.1 | 0.0 | 1 | 801 | 1 | 796 |
AIJ32665.1 | 0.0 | 1 | 802 | 1 | 806 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5FGZ_A | 1.89e-39 | 75 | 638 | 154 | 676 | E.coli PBP1b in complex with FPI-1465 [Escherichia coli K-12],5HL9_A E. coli PBP1b in complex with acyl-ampicillin and moenomycin [Escherichia coli K-12],5HLA_A E. coli PBP1b in complex with acyl-cephalexin and moenomycin [Escherichia coli K-12],5HLB_A E. coli PBP1b in complex with acyl-aztreonam and moenomycin [Escherichia coli K-12],5HLD_A E. coli PBP1b in complex with acyl-CENTA and moenomycin [Escherichia coli K-12],6YN0_A Structure of E. coli PBP1b with a FtsN peptide activating transglycosylase activity [Escherichia coli K-12],7LQ6_A Chain A, Penicillin-binding protein 1B [Escherichia coli K-12] |
3VMA_A | 2.13e-39 | 75 | 638 | 175 | 697 | CrystalStructure of the Full-Length Transglycosylase PBP1b from Escherichia coli [Escherichia coli K-12] |
3FWL_A | 4.49e-36 | 75 | 638 | 158 | 680 | CrystalStructure of the Full-Length Transglycosylase PBP1b from Escherichia coli [Escherichia coli] |
3NB6_A | 7.62e-35 | 63 | 258 | 6 | 189 | Crystalstructure of Aquifex aeolicus peptidoglycan glycosyltransferase in complex with Methylphosphoryl Neryl Moenomycin [Aquifex aeolicus] |
2OQO_A | 1.04e-34 | 63 | 258 | 6 | 189 | Crystalstructure of a peptidoglycan glycosyltransferase from a class A PBP: insight into bacterial cell wall synthesis [Aquifex aeolicus VF5],3D3H_A Crystal structure of a complex of the peptidoglycan glycosyltransferase domain from Aquifex aeolicus and neryl moenomycin A [Aquifex aeolicus],3NB7_A Crystal structure of Aquifex Aeolicus Peptidoglycan Glycosyltransferase in complex with Decarboxylated Neryl Moenomycin [Aquifex aeolicus] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P71707 | 2.30e-46 | 58 | 661 | 172 | 738 | Penicillin-binding protein 1A OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ponA1 PE=1 SV=3 |
A0R7G2 | 1.05e-45 | 56 | 661 | 108 | 676 | Penicillin-binding protein 1A OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=ponA1 PE=3 SV=1 |
O87626 | 4.29e-40 | 46 | 635 | 37 | 682 | Penicillin-binding protein 1A OS=Neisseria flavescens OX=484 GN=mrcA PE=3 SV=1 |
O66874 | 1.21e-38 | 56 | 628 | 42 | 632 | Penicillin-binding protein 1A OS=Aquifex aeolicus (strain VF5) OX=224324 GN=mrcA PE=1 SV=1 |
P02919 | 1.63e-38 | 75 | 638 | 211 | 733 | Penicillin-binding protein 1B OS=Escherichia coli (strain K12) OX=83333 GN=mrcB PE=1 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.470376 | 0.521501 | 0.003791 | 0.001655 | 0.000837 | 0.001835 |
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