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CAZyme Information: MGYG000001701_00941
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Corynebacterium afermentans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium afermentans | |||||||||||
| CAZyme ID | MGYG000001701_00941 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2452; End: 3186 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 89 | 237 | 5.3e-20 | 0.8222222222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG2951 | MltB | 2.10e-26 | 59 | 237 | 102 | 276 | Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis]. |
| cd13399 | Slt35-like | 5.89e-24 | 87 | 234 | 1 | 107 | Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). |
| pfam13406 | SLT_2 | 2.40e-06 | 156 | 200 | 155 | 200 | Transglycosylase SLT domain. This family is related to the SLT domain pfam01464. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNP93893.1 | 1.09e-161 | 1 | 244 | 25 | 268 |
| AIL97321.1 | 7.85e-155 | 1 | 244 | 25 | 268 |
| QNP89738.1 | 5.01e-137 | 17 | 244 | 40 | 267 |
| AKV59750.1 | 9.39e-124 | 1 | 244 | 27 | 269 |
| QQU84026.1 | 1.55e-122 | 1 | 244 | 27 | 269 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.783454 | 0.214189 | 0.001743 | 0.000229 | 0.000137 | 0.000249 |