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CAZyme Information: MGYG000001702_03264
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Virgibacillus picturae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Virgibacillus; Virgibacillus picturae | |||||||||||
| CAZyme ID | MGYG000001702_03264 | |||||||||||
| CAZy Family | GH19 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 312582; End: 313484 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH19 | 162 | 259 | 9.8e-22 | 0.43722943722943725 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3179 | COG3179 | 3.90e-29 | 126 | 295 | 1 | 199 | Predicted chitinase [General function prediction only]. |
| PRK10783 | mltD | 1.53e-14 | 2 | 118 | 337 | 452 | membrane-bound lytic murein transglycosylase D; Provisional |
| smart00257 | LysM | 2.95e-14 | 69 | 112 | 1 | 44 | Lysin motif. |
| cd00118 | LysM | 4.02e-14 | 68 | 112 | 1 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
| smart00257 | LysM | 4.90e-14 | 11 | 53 | 2 | 44 | Lysin motif. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVR00962.1 | 2.53e-217 | 8 | 300 | 124 | 416 |
| API98400.1 | 5.18e-161 | 8 | 300 | 42 | 347 |
| ASB68197.1 | 1.08e-159 | 8 | 300 | 129 | 434 |
| AYK99813.1 | 3.55e-159 | 8 | 300 | 164 | 469 |
| AYK72858.1 | 3.55e-159 | 8 | 300 | 164 | 469 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4B8V_A | 8.46e-11 | 11 | 112 | 44 | 160 | ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva] |
| 4OK7_A | 2.93e-07 | 152 | 299 | 39 | 221 | ChainA, Endolysin [Salmonella phage SPN1S],4OK7_B Chain B, Endolysin [Salmonella phage SPN1S],4OK7_C Chain C, Endolysin [Salmonella phage SPN1S] |
| 5JCD_A | 2.93e-07 | 10 | 110 | 84 | 189 | Crystalstructure of OsCEBiP [Oryza sativa Japonica Group],5JCD_B Crystal structure of OsCEBiP [Oryza sativa Japonica Group],5JCD_C Crystal structure of OsCEBiP [Oryza sativa Japonica Group] |
| 5JCE_A | 6.36e-07 | 10 | 110 | 84 | 189 | Crystalstructure of OsCEBiP complex [Oryza sativa Japonica Group],5JCE_B Crystal structure of OsCEBiP complex [Oryza sativa Japonica Group] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O64203 | 4.43e-16 | 147 | 299 | 198 | 360 | Endolysin A OS=Mycobacterium phage D29 OX=28369 GN=10 PE=1 SV=1 |
| P44187 | 9.06e-11 | 148 | 299 | 21 | 196 | Glycosyl hydrolase family 19 domain-containing protein HI_1415 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1415 PE=3 SV=1 |
| P37710 | 1.35e-10 | 7 | 119 | 495 | 615 | Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2 |
| Q5HRU2 | 2.31e-10 | 3 | 112 | 78 | 190 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1 |
| Q8CMN2 | 2.31e-10 | 3 | 112 | 78 | 190 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000042 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |