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CAZyme Information: MGYG000001702_03459

You are here: Home > Sequence: MGYG000001702_03459

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Virgibacillus picturae
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Virgibacillus; Virgibacillus picturae
CAZyme ID MGYG000001702_03459
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
936 MGYG000001702_4|CGC2 104944.8 4.9207
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001702 3675175 Isolate Saudi Arabia Asia
Gene Location Start: 36436;  End: 39246  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 787 918 3.1e-22 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 1.64e-69 681 936 6 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 2.60e-30 777 926 3 146
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 1.75e-09 787 838 1 45
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
pfam08239 SH3_3 1.39e-08 684 729 1 48
Bacterial SH3 domain.
smart00287 SH3b 4.07e-08 678 730 3 57
Bacterial SH3 domain homologues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
API94200.1 0.0 181 936 35 789
QTY18636.1 0.0 181 936 108 862
APC50322.1 6.31e-318 182 936 30 801
QXE01104.1 3.15e-283 185 935 326 1088
ASK62143.1 7.88e-273 186 936 333 1111

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 5.15e-44 727 936 36 244
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 2.58e-36 724 925 72 265
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
4PI7_A 6.77e-36 727 922 32 214
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6FXP_A 7.39e-36 724 925 42 235
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 4.30e-35 727 922 32 214
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 3.94e-77 638 936 593 880
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q6GI31 1.23e-65 198 936 461 1257
Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1
Q99V41 1.60e-65 198 936 452 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q931U5 1.60e-65 198 936 452 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
Q6GAG0 1.61e-65 198 936 454 1250
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.111781 0.879164 0.008132 0.000312 0.000284 0.000323

TMHMM  Annotations      download full data without filtering help

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