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CAZyme Information: MGYG000001703_04186
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Vibrio fluvialis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio fluvialis | |||||||||||
| CAZyme ID | MGYG000001703_04186 | |||||||||||
| CAZy Family | CBM4 | |||||||||||
| CAZyme Description | Cellulose 1,4-beta-cellobiosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 31906; End: 34191 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH9 | 260 | 752 | 2.2e-114 | 0.992822966507177 |
| CBM4 | 24 | 143 | 2.6e-30 | 0.9841269841269841 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00759 | Glyco_hydro_9 | 1.36e-97 | 262 | 752 | 1 | 374 | Glycosyl hydrolase family 9. |
| PLN02613 | PLN02613 | 8.87e-20 | 321 | 712 | 68 | 453 | endoglucanase |
| PLN02345 | PLN02345 | 1.41e-17 | 316 | 712 | 33 | 433 | endoglucanase |
| PLN03009 | PLN03009 | 9.15e-17 | 316 | 751 | 65 | 484 | cellulase |
| cd02850 | E_set_Cellulase_N | 3.53e-15 | 170 | 255 | 1 | 86 | N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AMF92651.1 | 0.0 | 1 | 761 | 1 | 761 |
| SPM17519.1 | 0.0 | 1 | 761 | 1 | 761 |
| QAV05918.1 | 0.0 | 1 | 761 | 1 | 761 |
| ASG06982.1 | 0.0 | 1 | 760 | 1 | 760 |
| AQL64519.1 | 0.0 | 1 | 760 | 1 | 760 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1UT9_A | 5.03e-159 | 171 | 757 | 7 | 606 | ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus] |
| 1RQ5_A | 2.06e-158 | 171 | 757 | 7 | 606 | ChainA, Cellobiohydrolase [Acetivibrio thermocellus] |
| 3X17_A | 3.56e-66 | 222 | 752 | 79 | 553 | Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium] |
| 6DHT_A | 3.89e-57 | 169 | 756 | 16 | 565 | Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483] |
| 5U0H_A | 1.32e-48 | 179 | 757 | 2 | 541 | Crystalstructure of GH family 9 endoglucanase J30 [Thermobacillus composti KWC4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DCH1 | 1.25e-165 | 20 | 757 | 38 | 813 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1 |
| P0C2S1 | 4.93e-165 | 20 | 757 | 38 | 813 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1 |
| Q05156 | 2.79e-152 | 23 | 758 | 33 | 746 | Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1 |
| P10476 | 1.39e-145 | 163 | 751 | 29 | 594 | Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2 |
| P14090 | 2.41e-133 | 23 | 758 | 183 | 911 | Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000380 | 0.528242 | 0.470721 | 0.000249 | 0.000214 | 0.000188 |