CAZyme Information: MGYG000001709_00758

Basic Information

• Species: Collinsella stercoris
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella stercoris
• CAZyme ID: MGYG000001709_00758
• CAZy Family: GH36
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1601	MGYG000001709_55|CGC3	175187.42	4.553

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001709	2399821	Isolate	Japan	Asia

• Gene Location: Start: 83474; End: 88279 Strand: +

Full Sequence      

MAYAGGNVTVAKNGDSVTIGNDAISRTFSIADAKVKTTEINNKRANVKLNPGEGSEEFII
KRTKKDNNAEPEQQPLDQTGWTATADSEENIGESAPHHGHDDNLIDNNPNTFWHTAYKDG
QANQPGNREMPHEVVIDLGKPTSFKGFSYDPRYTQQNGTGINGNIKDYALWVSTSPDAPS
IEGDHATAGWTKVMEGTFNYEGNKGEAIHVNIPEGKQGLCANVECVMLEAKSSVNNNNFA
GGEEFDLYAEPWVEPEQQEATPFFLKSSDLTLAGDPVMEDTTAVINKQEKTGKKLSFKFS
PVEFNGATYTITENIVAYNDDHYMRKYLEISVPEEDKLDAEIDYIDLESLDVTGAEGQWT
IPTDQGGIVGQPAARAILGQPFYADGMFFGCEFPAADTQIVDEQGKKIGRPRYYTGKTMD
RLANDGQAVRTEDGAIRYSTWQTVAGAAAAKDYRVVQADFFDYIDDISAPSEFRVQYNSW
YDNEKNITEGNITEAFSEIDKEFANSELAPLDTYAVDDGWTDYNAPKGFWTFNNKFPDEF
NSIAKLVQNFGSDLGVWIGPRGGYGTNGAIANSLQQQGLGVNAGGSIDVADRTYLENYAN
LVCDFQNKWHVNYWKWDGFADEGQYNHFGAGVDGVPGHSGNDKVKGHMTGGANQMYHCTD
MWEGWIDLYETVRKNAEKNGIANYWISSTTHTIPSAWLLQWVNSVWLQCQFDHARTAHGS
TVHDGNLNARDAVYYNFINGHQFQFPLAHIYNHDPVYGKTGTAMTQTTATAEGFQNYLYT
MAGRGTAFWELYYSDAIFDEEKYEVNAEFLKWYEENFHLLRNARMFGKWPVEGVDLMTGG
AAHSAEGHDQLNNDGKGIYNTYGYAGFEGDEGILTVRNANADKAQTLDFTFDDATLGVKG
NAGDTFNYVIERRHTQPGDKSEIADKGTFTIGEKVSLMLQPEESLTIRVSKPGEGDKQGP
SVETVRHDGAAELIVRMDEKVKGEAVFTVNGQKIDASKVKRSADGVTFHITLDKVPAQGE
KLEVKVSGITDMAGNAIAGDTASVDFHKDNVVASRCPSRLTTYTKKLASKDDSLVSKTGF
SVFSQVNTTGHGPLVKQEGAYELGIDENGMPYFDVNGIRTTGRVKVNDGAKHTVAGVREN
NGMLKIYVDGTNSRSAYDVKSFHHELPAGDILFAGGAFDKSKDEASAKVYDRALGYDEVA
KLHEKLNPNTEEHNLAQGKKATAAWTDTGNDAVKADEGSMSNITDGNKDSGAFGVFGADH
NTKSSYMQVDLGAVREVSSVGLWRYFQDGRTYRDTVVVLSEDETFTSEDTILYNSDKDNV
HKLGAGQDEPYAETKDGKTFPVPAGTKARYARVYMRGQTDDKTTNHVVEFEVIGRDLPVD
PGADIDTSKLYQRIDEVRDAIANGMWTPESIQKVMDKLEAAELVADCPKDKAQVDEALKG
LEDIESLLKKAVTVTFAFTGDVPAGVETPAALDIEQGTALGDKLPVPTAEGYVFAGWFTD
EACTAGNEFTAKTKVASDMTVFGKWVKDDGTVPPTPPVPGPETPEQSKPEVPEQKPSQKP
SKPGAGLPQTGDSSLLPIAACGAAGVALVATALVIRKRREA

Enzyme Prediction     

No EC number prediction in MGYG000001709_00758.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00754	F5_F8_type_C	3.49e-08	93	245	6	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam09479	Flg_new	6.19e-08	1453	1524	2	65	Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria.
pfam00754	F5_F8_type_C	8.52e-06	1235	1370	9	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
TIGR02543	List_Bact_rpt	8.53e-05	1487	1525	1	39	Listeria/Bacterioides repeat. This model describes a conserved core region, about 43 residues in length, of at least two families of tandem repeats. These include 78-residue repeats from 2 to 15 in number, in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few bacteria. [Unknown function, General]
pfam13385	Laminin_G_3	8.58e-04	1097	1200	42	151	Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QCC62414.1	0.0	49	1600	1	1657
BBK22244.1	1.31e-202	6	1450	44	1445
BBK62317.1	2.90e-202	6	1450	44	1445
SQG39183.1	3.82e-185	7	1282	38	1287
ATD48595.1	5.27e-184	7	1282	38	1287

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1W8N_A	3.82e-07	76	188	458	560	Contributionof the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens. [Micromonospora viridifaciens],1W8O_A Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens [Micromonospora viridifaciens]
1WCQ_A	3.82e-07	76	188	458	560	Mutagenesisof the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens],1WCQ_B Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens],1WCQ_C Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens]
2BER_A	3.82e-07	76	188	458	560	Y370GActive Site Mutant of the Sialidase from Micromonospora viridifaciens in complex with beta-Neu5Ac (sialic acid). [Micromonospora viridifaciens]
2BZD_A	3.82e-07	76	188	458	560	Galactoserecognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens],2BZD_B Galactose recognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens],2BZD_C Galactose recognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens]
1EUT_A	3.84e-07	76	188	462	564	Sialidase,Large 68kd Form, Complexed With Galactose [Micromonospora viridifaciens],1EUU_A Sialidase Or Neuraminidase, Large 68kd Form [Micromonospora viridifaciens]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q02834	2.18e-06	76	188	504	606	Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000017	0.000048	0.000002	0.000000	0.000000	0.000000

TMHMM  Annotations     

start	end
1573	1595