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CAZyme Information: MGYG000001709_00863
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella stercoris | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella stercoris | |||||||||||
| CAZyme ID | MGYG000001709_00863 | |||||||||||
| CAZy Family | GH95 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 11594; End: 15187 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH95 | 47 | 822 | 5.5e-230 | 0.9806094182825484 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14498 | Glyco_hyd_65N_2 | 6.07e-56 | 52 | 303 | 1 | 233 | Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain. |
| pfam13287 | Fn3_assoc | 4.93e-16 | 893 | 945 | 8 | 59 | Fn3 associated. |
| pfam13290 | CHB_HEX_C_1 | 1.01e-13 | 876 | 942 | 1 | 67 | Chitobiase/beta-hexosaminidase C-terminal domain. |
| pfam00754 | F5_F8_type_C | 8.97e-06 | 968 | 1082 | 7 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZM50986.1 | 0.0 | 32 | 863 | 10 | 847 |
| QGH70015.1 | 1.49e-257 | 31 | 892 | 22 | 879 |
| CBL25699.1 | 1.15e-232 | 45 | 1089 | 41 | 1262 |
| QHB25265.1 | 9.09e-232 | 50 | 1030 | 46 | 1183 |
| QEI33668.1 | 9.09e-232 | 50 | 1030 | 46 | 1183 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2EAB_A | 8.02e-172 | 52 | 862 | 20 | 895 | Crystalstructure of 1,2-a-L-fucosidase from Bifidobacterium bifidum (apo form) [Bifidobacterium bifidum],2EAB_B Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum (apo form) [Bifidobacterium bifidum],2EAC_A Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complex with deoxyfuconojirimycin [Bifidobacterium bifidum],2EAC_B Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complex with deoxyfuconojirimycin [Bifidobacterium bifidum] |
| 2EAD_A | 6.11e-171 | 52 | 862 | 20 | 895 | ChainA, Alpha-fucosidase [Bifidobacterium bifidum],2EAD_B Chain B, Alpha-fucosidase [Bifidobacterium bifidum] |
| 2EAE_A | 1.17e-170 | 52 | 862 | 19 | 894 | ChainA, Alpha-fucosidase [Bifidobacterium bifidum] |
| 2RDY_A | 4.47e-110 | 50 | 861 | 3 | 789 | ChainA, BH0842 protein [Halalkalibacterium halodurans C-125],2RDY_B Chain B, BH0842 protein [Halalkalibacterium halodurans C-125] |
| 7KMQ_A | 1.78e-103 | 50 | 825 | 41 | 761 | ChainA, Glyco_hyd_65N_2 domain-containing protein [Xanthomonas citri pv. citri str. 306],7KMQ_B Chain B, Glyco_hyd_65N_2 domain-containing protein [Xanthomonas citri pv. citri str. 306] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8L7W8 | 1.15e-86 | 38 | 806 | 36 | 797 | Alpha-L-fucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=FUC95A PE=1 SV=1 |
| A2R797 | 3.78e-80 | 25 | 822 | 2 | 778 | Probable alpha-fucosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=afcA PE=3 SV=1 |
| Q5AU81 | 1.93e-62 | 69 | 817 | 45 | 792 | Alpha-fucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=afcA PE=1 SV=1 |
| Q2USL3 | 7.81e-62 | 52 | 825 | 18 | 719 | Probable alpha-fucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=afcA PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000577 | 0.998479 | 0.000200 | 0.000290 | 0.000229 | 0.000202 |
