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CAZyme Information: MGYG000001711_00131
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Holdemanella biformis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Holdemanella; Holdemanella biformis | |||||||||||
| CAZyme ID | MGYG000001711_00131 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 37360; End: 39543 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 25 | 608 | 1.7e-140 | 0.7154255319148937 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK10340 | ebgA | 1.05e-146 | 3 | 707 | 241 | 984 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
| PRK09525 | lacZ | 2.73e-133 | 29 | 709 | 291 | 1013 | beta-galactosidase. |
| pfam02836 | Glyco_hydro_2_C | 4.45e-108 | 74 | 348 | 1 | 297 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| COG3250 | LacZ | 1.43e-105 | 8 | 605 | 215 | 800 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| smart01038 | Bgal_small_N | 2.03e-69 | 464 | 721 | 4 | 272 | Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| APC40255.1 | 1.98e-193 | 29 | 721 | 279 | 1003 |
| QAA30508.1 | 2.15e-192 | 19 | 717 | 271 | 999 |
| AVQ18273.1 | 1.59e-190 | 26 | 725 | 273 | 1001 |
| APF22914.1 | 2.31e-185 | 9 | 718 | 255 | 1001 |
| APH06170.1 | 2.65e-185 | 16 | 721 | 267 | 1008 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6S6Z_A | 1.45e-119 | 29 | 707 | 273 | 966 | Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8] |
| 6SD0_A | 1.48e-119 | 29 | 707 | 274 | 967 | Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8] |
| 3DEC_A | 6.01e-96 | 40 | 726 | 300 | 999 | ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3BGA_A | 1.79e-92 | 31 | 726 | 295 | 1003 | Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482] |
| 3MUY_1 | 2.65e-88 | 29 | 713 | 290 | 1013 | Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9K9C6 | 8.19e-175 | 2 | 717 | 249 | 1007 | Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1 |
| P23989 | 4.33e-159 | 23 | 712 | 272 | 1013 | Beta-galactosidase OS=Streptococcus thermophilus OX=1308 GN=lacZ PE=3 SV=1 |
| O52847 | 2.25e-157 | 3 | 721 | 279 | 1031 | Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1 |
| Q1G9Z4 | 1.26e-152 | 40 | 713 | 297 | 994 | Beta-galactosidase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / BCRC 10696 / JCM 1002 / NBRC 13953 / NCIMB 11778 / NCTC 12712 / WDCM 00102 / Lb 14) OX=390333 GN=lacZ PE=3 SV=3 |
| A1A3T0 | 3.97e-150 | 9 | 722 | 279 | 1049 | Beta-galactosidase BgaC OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=bgaC PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000057 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |