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CAZyme Information: MGYG000001713_02140

You are here: Home > Sequence: MGYG000001713_02140

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vibrio furnissii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio furnissii
CAZyme ID MGYG000001713_02140
CAZy Family GH24
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
138 15655.23 10.2524
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001713 4958658 Isolate Japan Asia
Gene Location Start: 86612;  End: 87028  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001713_02140.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH24 5 127 8.8e-26 0.9124087591240876

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00735 T4-like_lys 7.72e-30 6 134 3 142
bacteriophage T4-like lysozymes. Bacteriophage T4-like lysozymes hydrolyze the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc) in peptidoglycan heteropolymers of prokaryotic cell walls. Members include a variety of bacteriophages (T4, RB49, RB69, Aeh1), as well as Dictyostelium.
cd00737 lyz_endolysin_autolysin 9.22e-23 7 123 3 120
endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.
PHA02596 5 4.96e-18 6 134 176 331
baseplate hub subunit and tail lysozyme; Provisional
COG3772 RrrD 2.12e-11 5 125 11 135
Phage-related lysozyme (muramidase), GH24 family [Cell wall/membrane/envelope biogenesis].
cd16901 lyz_P1 2.51e-08 3 123 4 124
P1 lysozyme Lyz-like proteins. Enterobacteria phage P1 lysozyme Lyz is secreted to the Escherichia coli periplasm where it is membrane bound and inactive. Activation involves the release from the membrane, an intramolecular thiol-disulfide isomerization and extensive structural rearrangement of the N-terminal region. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDC94443.1 1.15e-94 1 138 1 138
QTG97684.1 4.70e-94 1 138 1 138
QTG90322.1 4.70e-94 1 138 1 138
AVH34039.1 1.92e-93 1 138 1 138
AVH33438.1 1.92e-93 1 138 1 138

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1QTZ_A 9.11e-18 7 134 5 156
ChainA, PROTEIN (T4 LYSOZYME) [Tequatrovirus T4]
176L_A 3.58e-17 7 134 5 156
ChainA, T4 LYSOZYME [Tequatrovirus T4],176L_B Chain B, T4 LYSOZYME [Tequatrovirus T4]
1L55_A 9.97e-17 7 134 5 156
ChainA, LYSOZYME [Tequatrovirus T4]
1L88_A 9.97e-17 7 134 5 156
ChainA, T4 LYSOZYME [Tequatrovirus T4]
156L_A 9.97e-17 7 134 5 156
ChainA, T4 LYSOZYME [Tequatrovirus T4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q556F2 2.24e-11 40 134 66 164
Probable T4-type lysozyme 1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274831 PE=3 SV=1
Q86AA1 2.34e-10 8 134 8 164
Probable T4-type lysozyme 2 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274291 PE=2 SV=1
Q9T1T5 8.99e-08 8 89 10 93
Endolysin OS=Acyrthosiphon pisum secondary endosymbiont phage 1 OX=2682836 GN=13 PE=3 SV=1
P16009 5.88e-06 7 134 178 334
Pre-baseplate central spike protein Gp5 OS=Enterobacteria phage T4 OX=10665 GN=5 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001713_02140.