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CAZyme Information: MGYG000001713_02278

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vibrio furnissii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio furnissii
CAZyme ID MGYG000001713_02278
CAZy Family CBM5
CAZyme Description Hemagglutinin/proteinase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
608 MGYG000001713_14|CGC3 65315.3 4.9516
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001713 4958658 Isolate Japan Asia
Gene Location Start: 234672;  End: 236498  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001713_02278.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3227 LasB 5.90e-160 1 501 1 507
Zn-dependent metalloprotease [Posttranslational modification, protein turnover, chaperones].
cd09597 M4_TLP 2.61e-96 240 500 1 278
Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease. This peptidase M4 family includes several endopeptidases such as thermolysin (EC, aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, protealysin, and bacillolysin (EC Typically, the M4 peptidases consist of a presequence (signal sequence), a propeptide sequence, and a peptidase unit. The presequence is cleaved off during export while the propeptide has inhibitory and chaperone functions and facilitates folding. The propeptide remains attached until the peptidase is secreted and can be safely activated. All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The active site is found between two sub-domains; the N-terminal domain contains the HEXXH zinc-binding motif while the helical C-terminal domain, which is unique for the family, carries the third zinc ligand. These peptidases are secreted eubacterial endopeptidases from Gram-positive or Gram-negative sources that degrade extracellular proteins and peptides for bacterial nutrition. They are selectively inhibited by Steptomyces metalloproteinase inhibitor (SMPI) as well as by phosphoramidon from Streptomyces tanashiensis. A large number of these enzymes are implicated as key factors in the pathogenesis of various diseases, including gastritis, peptic ulcer, gastric carcinoma, cholera and several types of bacterial infections, and are therefore important drug targets. Some enzymes of the family can function at extremes of temperatures, while some function in organic solvents, thus rendering them novel targets for biotechnological applications. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing. It has also been used in production of the artificial sweetener aspartame.
pfam01447 Peptidase_M4 1.85e-44 211 353 1 147
Thermolysin metallopeptidase, catalytic domain.
pfam02868 Peptidase_M4_C 8.07e-44 356 500 1 167
Thermolysin metallopeptidase, alpha-helical domain.
cd02699 M4_M36 3.46e-23 247 499 5 313
Peptidase M4 family (includes thermolysin, aureolysin, neutral protease and bacillolysin) and Peptidase M36 family (also known as fungalysin). This family includes the peptidases M4 as well as M36, both belonging to the Gluzincin family. The M4 peptidase family includes numerous zinc-dependent metallopeptidases that hydrolyze peptide bonds, such as thermolysin (EC, pseudolysin (the extracellullar elastase of Pseudomonas aeruginosa), aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, as well as bacillolysin (EC The M36 family also known as fungalysin (elastinolytic metalloproteinase) family, includes endopeptidases from pathogenic fungi. Both M4 and M36 families have similar folds and contain the Zn-binding site and the active site HEXXH motif. The eukaryotic M36 and bacterial M4 families of metalloproteases also share a conserved domain in their propeptides called FTP (fungalysin/thermolysin propeptide).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QXX06051.1 6.37e-147 69 608 64 606
CAE6907070.1 7.02e-146 19 608 13 610
AZQ09362.1 1.66e-138 12 503 12 497
QXC55859.1 3.28e-138 46 608 42 608
AQS37828.1 1.18e-135 32 507 40 500

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7ECC_A 2.20e-139 201 508 1 304
ChainA, M4 family peptidase [Pseudoalteromonas lipolytica SCSIO 04301]
3NQY_B 3.79e-135 201 519 1 313
Crystalstructure of the autoprocessed complex of Vibriolysin MCP-02 with a single point mutation E346A [Pseudoalteromonas sp. SM9913]
3NQZ_B 3.79e-135 201 519 1 313
Crystalstructure of the autoprocessed Vibriolysin MCP-02 with E369A mutation [Pseudoalteromonas sp. SM9913]
3NQX_A 7.83e-135 201 505 1 301
Crystalstructure of vibriolysin MCP-02 mature enzyme, a zinc metalloprotease from M4 family [Pseudoalteromonas sp. SM9913]
1EZM_A 5.76e-125 205 500 5 295
Three-DimensionalStructure Of The Elastase Of Pseudomonas Aeruginosa At 1.5 Angstroms Resolution [Pseudomonas aeruginosa],1U4G_A Elastase of Pseudomonas aeruginosa with an inhibitor [Pseudomonas aeruginosa],3DBK_A Pseudomonas aeruginosa elastase with phosphoramidon [Pseudomonas aeruginosa],6F8B_A LasB bound to thiol based inhibitor [Pseudomonas aeruginosa],6FZX_A LasB, hydroxymate Inhibitor Complex [Pseudomonas aeruginosa],7AJR_AAA Chain AAA, Keratinase KP2 [Pseudomonas aeruginosa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P43147 0.0 1 608 1 611
Virulence metalloprotease OS=Vibrio anguillarum OX=55601 GN=empA PE=1 SV=1
P24153 0.0 1 608 1 609
Hemagglutinin/proteinase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=hap PE=1 SV=1
Q00971 1.80e-299 1 608 1 609
Neutral protease OS=Vibrio proteolyticus OX=671 GN=nprV PE=1 SV=1
P14756 3.81e-151 51 500 55 492
Elastase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=lasB PE=1 SV=1
Q02RJ6 2.16e-150 51 500 55 492
Elastase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=lasB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

0.000535 0.998579 0.000277 0.000212 0.000200 0.000180

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001713_02278.