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CAZyme Information: MGYG000001720_02043
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp002350355 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002350355 | |||||||||||
| CAZyme ID | MGYG000001720_02043 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 20811; End: 22337 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 86 | 418 | 1.9e-58 | 0.9076923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.57e-33 | 47 | 461 | 73 | 542 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 3.84e-26 | 134 | 342 | 33 | 247 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 6.19e-26 | 31 | 348 | 23 | 359 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 3.84e-22 | 54 | 346 | 21 | 302 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 3.58e-19 | 156 | 351 | 150 | 346 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNT65232.1 | 1.28e-135 | 1 | 461 | 1 | 476 |
| QEC72689.1 | 2.07e-76 | 43 | 454 | 50 | 440 |
| BAV07348.1 | 4.82e-66 | 43 | 454 | 41 | 433 |
| AHF18012.1 | 5.94e-66 | 40 | 422 | 26 | 404 |
| QEC57624.1 | 1.27e-64 | 45 | 460 | 32 | 436 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1BHE_A | 4.77e-27 | 52 | 347 | 1 | 316 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 7E56_A | 1.10e-11 | 146 | 349 | 69 | 269 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
| 6KVE_A | 1.16e-11 | 146 | 349 | 77 | 277 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
| 6KVH_A | 1.16e-11 | 146 | 349 | 77 | 277 | ChainA, endo-polygalacturonase [Evansstolkia leycettana] |
| 1HG8_A | 3.81e-11 | 134 | 335 | 50 | 267 | Endopolygalacturonasefrom the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P18192 | 1.73e-27 | 65 | 347 | 42 | 342 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P26509 | 3.76e-26 | 52 | 347 | 27 | 342 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| Q9LW07 | 1.06e-24 | 52 | 346 | 19 | 302 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| P48978 | 2.95e-23 | 54 | 350 | 96 | 389 | Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1 |
| A7PZL3 | 3.26e-17 | 41 | 335 | 46 | 361 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000277 | 0.998976 | 0.000202 | 0.000193 | 0.000171 | 0.000144 |