logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001720_02088

You are here: Home > Sequence: MGYG000001720_02088

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp002350355
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002350355
CAZyme ID MGYG000001720_02088
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
582 MGYG000001720_43|CGC2 63840.07 4.7486
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001720 3435079 MAG Sweden Europe
Gene Location Start: 16699;  End: 18447  Strand: -

Full Sequence      Download help

MKQILFSFLA  LSTVLSASAQ  STYTIGFNPS  EHYQTIMDFG  ASDCWTADFV  GRYFATTEKE60
KAARLLFSQK  MDSNGNPEGI  GLSVWRVNLG  AGSSEQGDGS  NITDVTRRAD  CYIKSDGTYD120
WNRCAGQRWF  MEQAKSYGVD  HFLLFANSAP  IYYTANGLAN  NKDGAAGANL  KEDCYDDFAS180
YIATTARHFT  DLGYPITYVD  PVNEPAFDWR  EGQEGSPWQN  AEISRLVKEL  DQALDKQQLS240
GTSIVMPEAS  AWDRLYQHCS  DYGGRASDQI  EAFWNPANSE  TYIGGLGHVE  KAVAGHDYWT300
FGSDATLVDT  RKKVAQKAAQ  YGLKVMQTEW  SMLDKEPDSD  TGFPGSYDEA  TDMDIALFMG360
KLIYVGLTEG  NMSSWSYWTA  MAQSQWSQKN  RFELLRLNAT  GDTGYESYGD  LTKGGTVTAN420
PNLWVLGNYS  RFVRPGYQRI  AMTGTTVDDI  DGLMATAFVS  PDGKRIVAVF  VNNGGAAKGV480
KFNTSATAVH  KYVTDATHSL  SLDATLSTTP  NADTRILIPA  RSVVTFTLDG  DFTTGIQSIE540
EDAKKVNAVF  SLTGMKVADD  VSLLHSLPKG  IYVVDGKKVV  NH582

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Created with Snap29588711614517420323226129132034937840743646549452355225526GH30
Family Start End Evalue family coverage
GH30 25 526 7e-166 0.9917355371900827

CDD Domains      download full data without filtering help

Created with Snap29588711614517420323226129132034937840743646549452355224380Glyco_hydr_30_26529XynC436526Glyco_hydro_30C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 1.34e-116 24 380 3 355
O-Glycosyl hydrolase family 30.
COG5520 XynC 9.26e-18 6 529 15 429
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189 Glyco_hydro_30C 9.70e-06 436 526 1 63
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Created with Snap2958871161451742032322612913203493784074364654945235521580BCS84534.1|GH30_49579VEH15029.1|GH30_41582EFI72736.1|GH30_4|3.2.1.3810580QNT66374.1|GH30_430580QVJ80556.1|GH30_4
Hit ID E-Value Query Start Query End Hit Start Hit End
BCS84534.1 2.49e-266 1 580 1 581
VEH15029.1 2.61e-258 9 579 9 579
EFI72736.1 2.85e-226 1 582 1 582
QNT66374.1 3.09e-216 10 580 12 582
QVJ80556.1 1.53e-215 30 580 197 732

PDB Hits      download full data without filtering help

Created with Snap295887116145174203232261291320349378407436465494523552335293CLW_A105286M5Z_A205287NCX_AAA245287O0E_A1615264FMV_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 3.61e-74 33 529 16 497
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
6M5Z_A 1.59e-21 10 528 10 453
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
7NCX_AAA 5.35e-14 20 528 7 454
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
7O0E_A 1.98e-13 24 528 4 447
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
4FMV_A 7.87e-10 161 526 99 384
CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2958871161451742032322612913203493784074364654945235521528sp|G2Q1N4|XY30A_MYCTT
Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 2.25e-14 1 528 1 471
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000332 0.998965 0.000176 0.000182 0.000163 0.000151

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001720_02088.