CAZyme Information: MGYG000001732_00003

Basic Information

• Species: HGM11530 sp900751685
• Lineage: Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; HGM11530; HGM11530 sp900751685
• CAZyme ID: MGYG000001732_00003
• CAZy Family: PL9
• CAZyme Description: Pectate lyase L

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
505		56123.36	4.3618

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001732	3073889	MAG	Sweden	Europe

• Gene Location: Start: 6021; End: 7538 Strand: -

Full Sequence      

MIKTGFRVTFFLLAAFMMLSVRAYARDYYVAAGGSDLSAGSIEQPFQSLMRAQDAAVEGD
TVYIRGGVYSVFEIAAADPNYNYVHDMTKSGITYRAYPGERPVFDFAEVPTNLRVCAFHV
RSGVQDVIFEGFDVTGVKVGEQKQSECFRIEGNASLINMACYNNEASGFYFNGKRASGEC
INCDSYDNIGPTALSIGNIDGFGAHGGKVDFRYCRAWNNSDDGFDCISSFGPVTFDHCWA
FDMRAGGDSNGFKVGGYGRADASRVPEIVPVHTVKYCIAAENNSNGFYANHQPGQAAEWT
YNTAFHNRRGNYNMLECASREDNTDIPGTREVLHFNISYNGQITNDNNPPESVTDNSWTV
EGLTLSDQDFMSLDWTELSLPRQEDGSLPEISFMRPAENDKLKGMGCFAEELFLKWEVSV
RQNEYIFDIKALNYDQNSLFVAALYQEDRLVGVGSQKYSGTADLRISTQCEVPADMAKLL
IWDGLDSIVPLYEAESRPLEEGPFF

Enzyme Prediction     

No EC number prediction in MGYG000001732_00003.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL9	23	405	1.7e-91	0.9705882352941176

CDD Domains     

MGYG000001732_00003 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AWV81016.1	1.97e-164	13	408	19	412
ADZ22427.1	1.97e-164	13	408	19	412
AAK81317.1	1.97e-164	13	408	19	412
AEI32814.1	1.97e-164	13	408	19	412
AFH63317.1	1.08e-160	14	411	27	431

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5OLQ_A	7.82e-57	26	409	3	428	Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]
1RU4_A	5.55e-26	26	406	15	379	ChainA, Pectate lyase [Dickeya chrysanthemi]
3VST_A	9.19e-06	27	108	2	77	Thecomplex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_B The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_C The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_D The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_A The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_B The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_C The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_D The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_A The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_B The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_C The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_D The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P0C1A6	2.24e-25	26	406	40	404	Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7	4.11e-25	26	406	40	404	Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000368	0.998827	0.000244	0.000186	0.000187	0.000178

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001732_00003.