logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001732_00200

You are here: Home > Sequence: MGYG000001732_00200

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM11530 sp900751685
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; HGM11530; HGM11530 sp900751685
CAZyme ID MGYG000001732_00200
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2130 232808.06 4.3172
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001732 3073889 MAG Sweden Europe
Gene Location Start: 42842;  End: 49234  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001732_00200.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 34 597 2.3e-66 0.5438829787234043

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 4.50e-21 36 557 4 439
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 1.19e-20 34 597 31 514
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK10150 PRK10150 6.91e-18 102 608 50 523
beta-D-glucuronidase; Provisional
pfam18565 Glyco_hydro2_C5 1.47e-13 843 936 10 102
Glycoside hydrolase family 2 C-terminal domain 5. Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme.
pfam02837 Glyco_hydro_2_N 2.32e-10 53 185 1 131
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGH35456.1 1.06e-294 42 1140 16 1101
ASA20342.1 1.35e-290 42 1134 8 1086
AGT88372.1 2.88e-203 43 950 1 801
ADJ49535.1 2.88e-203 43 950 1 801
QMV17606.1 2.72e-190 25 953 30 870

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6HPD_A 2.10e-164 40 957 33 821
Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901]
4YPJ_A 4.17e-41 46 941 11 808
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
7CWD_A 2.95e-39 46 942 5 803
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
5DMY_A 1.85e-35 40 947 22 889
Beta-galactosidase- construct 33-930 [Bifidobacterium bifidum],5DMY_B Beta-galactosidase - construct 33-930 [Bifidobacterium bifidum],5DMY_C Beta-galactosidase - construct 33-930 [Bifidobacterium bifidum]
6QUB_A 2.10e-34 40 947 16 883
Truncatedbeta-galactosidase III from Bifidobacterium bifidum in complex with galactose [Bifidobacterium bifidum],6QUC_A Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum],6QUC_B Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum],6QUD_A 2-deoxy-galactose reaction intermediate of a Truncated beta-galactosidase III from Bifidobacterium bifidum [Bifidobacterium bifidum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KN75 9.01e-164 40 957 24 812
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
A7LXS9 2.35e-33 40 931 40 839
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
P77989 2.02e-23 46 926 7 723
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
Q56307 3.32e-15 37 526 32 442
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
T2KPJ7 3.65e-15 76 731 65 649
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000308 0.999014 0.000189 0.000178 0.000152 0.000136

TMHMM  Annotations      download full data without filtering help

start end
7 29